Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2210 ATGAGTAGTGAAAGCATCCCGTCTCAGTCTGCCAGTGAAAATAGCACTATAAACGTTGAGCCTCAGCTCCCAAATTCAAGCCCTAACCACAAGCGCGAAGCTGATTCAGAAACTCATGATTCGACGGCGAAGAAGTCCAGAACTGAAGCTCCGACTACCCCAGATGCTTCCGGCGGTGATGAAGCACGGAAGCCAGAGTCTGGTTCAGGCGAACAGAATGTAAAGGAAGTAGTTTTTGAGATTGAGGCGGATGCAGCTGAGGATAAGGGATCTAGGCATACCATGGAAGACGCCTGGGTGGTGCTTCCGGACGCGAGTTTGGATTTCCCGGGAAAACTGAGATGTGCACATTTTGCAATTTATGATGGACATGGAGGCCGGTTAGCTGCAGAGTATGCTCAAACCCATTTGCACAGAAATGTTCTTTTGGCAGGATTACCACGTGAGTTGTTAGATGTAAAGGCAGCTAAAAAGGCCATACTGGAAGgatTTCGCAAAACTGATGAGTACCTTCTTCAAGAAAGTGCTACAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTGGGGCAAAAAGTTTTTGTTGCAAATGTAGGAGATGCTAAAGCAGTTTTAGCTCGGTCAGCTATAATTGATGGATCCCAAAACCACTCCAATGGAGTCCAAACATTGAAGGCCATTGTTTTGACGAGGGAACACAAGGCCATCTTCCCTCAGGAGCGCACTCGCATTCAAAAGGCTGGTGGTGTTGTGAGCTCGAATGGACGATTACAAGGGCGCCTAGAAGTTTCTAGGGCATTTGGAGATCGGCAGTTCAAAAAGGTGGGTGTTATTGCAACCCCAGATATTCATTCTTTTGACCTCACTGATAGAGAGCATTTTATCATCCTTGGCTGTGATGGCCTGTGGGGGGTATTTGGTCCTAGTGATGCTGTTGATTTTGTTCAGAAACTATTGAATGAGGGGTTGCCTGTCCCAACTGTGTGCCGCCATCTTGTGAGAGAAGCCGTTCGTGAGCGTCGCTGCAAGGATAATTGCACTGCAATTGTTATTGTATTCAACCGCAAGTAA 1080 0.4722 MSSESIPSQSASENSTINVEPQLPNSSPNHKREADSETHDSTAKKSRTEAPTTPDASGGDEARKPESGSGEQNVKEVVFEIEADAAEDKGSRHTMEDAWVVLPDASLDFPGKLRCAHFAIYDGHGGRLAAEYAQTHLHRNVLLAGLPRELLDVKAAKKAILEGFRKTDEYLLQESATGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARSAIIDGSQNHSNGVQTLKAIVLTREHKAIFPQERTRIQKAGGVVSSNGRLQGRLEVSRAFGDRQFKKVGVIATPDIHSFDLTDREHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVPTVCRHLVREAVRERRCKDNCTAIVIVFNRK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2210 359 SUPERFAMILY PP2C-like 81 357 IPR036457 -
Sto8g2210 359 MobiDBLite consensus disorder prediction 30 46 - -
Sto8g2210 359 CDD PP2Cc 86 356 IPR001932 -
Sto8g2210 359 MobiDBLite consensus disorder prediction 1 74 - -
Sto8g2210 359 ProSiteProfiles PPM-type phosphatase domain profile. 82 356 IPR001932 -
Sto8g2210 359 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 21 353 - -
Sto8g2210 359 PANTHER PROTEIN PHOSPHATASE 2C 21 353 IPR015655 GO:0004722|GO:0006470
Sto8g2210 359 SMART PP2C_4 78 354 IPR001932 -
Sto8g2210 359 Pfam Protein phosphatase 2C 86 344 IPR001932 -
Sto8g2210 359 Gene3D - 60 359 IPR036457 -
Sto8g2210 359 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2210 Sto-Chr8 14623908 14630121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2210 28 308 PP2C-type Phosphatase Gene Family AT1G18030 69.521 1.53e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2210 K17500 - mnt:21396468 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2210 8 14623908 14630121 Sto8g2210 8 14623908 14630121 ECH