Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2205 ATGGCTtcttctccatttctcctcCCTCCGTCTCCCTCACGTCTCTCTCCTCTCAAGCCAACACTCTCCCTCCCTTCTCGTTCTCCGCTTCTTCTCCAACAGCTACACCCACGCACACTCCCCTCTTCTCTCCACCTGCGTTCCCCACTCCGTACTAGAACTCTATCAATCCCACTTGCCTATGTCACCGGACCCGGATCCGACCCCGTTTTCAGCGAGTCCGACCCCAAGATTGATGCGTCGGATCCTCGGCCGGAGAAAGTCAAGCCACCCAGCGTCATAAGCTGGGGGCTCATGTGGATGCTTTTGATGAAACACAAATTGCGGCTTGGCCTTTCGGTTGTGACTCTAATCTGTTGCACCACTTGTACTCTTTCTATGCCCTTATTGTCTGgtaaattttttgaagttctaATTGGTGCTAGACAAGAACCATTATGGCAGTTGCTCAGTAAGGTTGGAATTCTGTATGCCCTGGAGCCAGTTTTAACTGTTATTTTTGTTGTAAACATGAACGTTGTGTGGGAGAAGGTAATGTCCATACTGAGAGCTCAGATATTTGGAAGGATATTGGTCCAGAAGGTGGAATTTTTTGACAGATACAAGGTTGGTGAACTCACTGGTTTGTTAACCTCTGATTTGGGTTCTCTTGAGAAAATTGTGGGTGAGAATGTTTCAAGGGATCGTGGATTCAGGGCATTATCTGAGGCAAGCATTTCTACACCAGTCAGAATTTCATCTGGAGTCatcatttttctgtattctttgtTGTTACAGGTTATTGGGACGATATGCATACTTTTTGCTTTATCACCTCAACTTGCTCCAATTCTGGGAGTTTTAATGCTTGCGATTTCTGCTTTAGTTGCTGTCTACAAGAGATCTACTCTGCCAGTTTTCAAAGCACATGGATTGGTTCAAGCATCCATATCTGACACTGTAGCAGAAACATTTTCTGCTATTCGTACAGTAAGATCCTTTGGTGGTGAGAAACGGCAAATGTTTACATTTGCTAACCAGGTTCTTTCTTACCAATCAAGTGGGATAAAGCTTGGAGCTTTTAAATCTATAAATGAATCAGTGACTAGAATTGCTGTGTATATTTCTCTACTGGCATTATATATCCTTGGAGGAAGCAAAGTCAAAGCGGGGGAACTCTCTGTTGGAACTGTGGCATCATTTATTGGATATACCTTCACATTAACTTTCGCAGTTCAAGGACTGGTCAATACTTTGGGTGATCTTCGTGGTGCTCTTGCTGCTGTTGAGAGGATCAATTCTGTTTTCTCTGGGGTTCAATTTGACGAAGCCCTTGCTTATGGCTTAGAGAAAGAACTGAAACAGAAAGAATTGGTTGATGATAACTTAAAACTGTTCTTCTCTGGCAATTCTGCTGAGAAAAACCAAAACAAATATTTGCATTATATGTCAGCACTGAAATCATCAAGCAATTTGTCTAGCTTAGCATGGTCTGGAGATGTTTGTCTTGAAGATGTGTATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTAAGTGGCTTAAATTTAACACTAAAATGTGGAACTGTAACTGCATTGGTTGGTCCTAGTGGTGCTGGCAAAAGTACAATAGTACAGCTATTGGCTCGTTTTTATGAGCCAGCAAAAGGTCGTATAACAGTTGCAGGAGAGGATGTCCGCACATTTGACAAGAGCGAATGGGCCCGAGTTGTCTCCATTGTAAATCAAGAGCCTGTTCTATTTTCGGTGTCTGTTGGAGAAAATATTGCATATGGGCTTCCGGATGATACTGTTTCTAAAGATGATGTGATTAAGGCAGCAAAAGCTGCAAATGCTCATGATTTCATAGTTTCACTTCCACAGGGCTATGATACCCTTGTTGGTGAGCGTGGAGGCTTACTGAGTGGAGGACAGAGACAGAGAATTGCTATTGCGCGAGCTCTCCTAAAGAATGCCCCCGTTCTTATACTTGATGAGGCCACCAGTGCTCTAGATGCAGTTAGTGAGCGGTTGGTCCAGGGTGCTCTCAACCATTTGATGAAGGGTAGGACAACGTTAGTAATAGCTCATCGGTTGAGTACAGTTCAAAATGCCCATCAAATTGCAGTCTGTAATGATGGCAGGATTGCAGAACTTGGCACGCACTCTGAGTTATTGGCCAAGAAGGGCCATTATGCTTCTCTGGTTGGCACTCAAAGGCTTGCATTTGAATGA 2217 0.4272 MASSPFLLPPSPSRLSPLKPTLSLPSRSPLLLQQLHPRTLPSSLHLRSPLRTRTLSIPLAYVTGPGSDPVFSESDPKIDASDPRPEKVKPPSVISWGLMWMLLMKHKLRLGLSVVTLICCTTCTLSMPLLSGKFFEVLIGARQEPLWQLLSKVGILYALEPVLTVIFVVNMNVVWEKVMSILRAQIFGRILVQKVEFFDRYKVGELTGLLTSDLGSLEKIVGENVSRDRGFRALSEASISTPVRISSGVIIFLYSLLLQVIGTICILFALSPQLAPILGVLMLAISALVAVYKRSTLPVFKAHGLVQASISDTVAETFSAIRTVRSFGGEKRQMFTFANQVLSYQSSGIKLGAFKSINESVTRIAVYISLLALYILGGSKVKAGELSVGTVASFIGYTFTLTFAVQGLVNTLGDLRGALAAVERINSVFSGVQFDEALAYGLEKELKQKELVDDNLKLFFSGNSAEKNQNKYLHYMSALKSSSNLSSLAWSGDVCLEDVYFSYPLRPDVEILSGLNLTLKCGTVTALVGPSGAGKSTIVQLLARFYEPAKGRITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDDTVSKDDVIKAAKAANAHDFIVSLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPVLILDEATSALDAVSERLVQGALNHLMKGRTTLVIAHRLSTVQNAHQIAVCNDGRIAELGTHSELLAKKGHYASLVGTQRLAFE 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2205 738 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 47 736 IPR039421 -
Sto8g2205 738 Gene3D - 484 734 IPR027417 -
Sto8g2205 738 MobiDBLite consensus disorder prediction 1 20 - -
Sto8g2205 738 CDD ABC_6TM_TAP_ABCB8_10_like 115 425 - -
Sto8g2205 738 SUPERFAMILY ABC transporter transmembrane region 247 429 IPR036640 GO:0005524|GO:0016021
Sto8g2205 738 Gene3D ABC transporter type 1, transmembrane domain 83 430 IPR036640 GO:0005524|GO:0016021
Sto8g2205 738 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 494 732 IPR003439 GO:0005524
Sto8g2205 738 Gene3D ABC transporter type 1, transmembrane domain 459 483 IPR036640 GO:0005524|GO:0016021
Sto8g2205 738 CDD ABC_MTABC3_MDL1_MDL2 496 733 - -
Sto8g2205 738 MobiDBLite consensus disorder prediction 68 87 - -
Sto8g2205 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 733 IPR027417 -
Sto8g2205 738 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 47 736 - -
Sto8g2205 738 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 112 417 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g2205 738 SMART AAA_5 521 725 IPR003593 -
Sto8g2205 738 SUPERFAMILY ABC transporter transmembrane region 99 225 IPR036640 GO:0005524|GO:0016021
Sto8g2205 738 Pfam ABC transporter transmembrane region 249 404 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g2205 738 Pfam ABC transporter transmembrane region 111 225 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g2205 738 Pfam ABC transporter 512 663 IPR003439 GO:0005524
Sto8g2205 738 ProSitePatterns ABC transporters family signature. 635 649 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2205 Sto-Chr8 14586585 14593521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2205 491 738 Calmodulin-binding Proteins AT2G36910 53.386 2.22e-73 258