Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2181 ATGCTCTGTTCAAACTTGGAACCGCAACTTCCTTTCCTATGCTCTGTTCAGTTAATGTCTGAAGAGCATGATGGGTTCCACGACTGTCAAGGCATGTTCAAATGTGGGAATCTGGATAACTTATATTACCCATTCTGGTCAGACACAGACGACAGTTATTATGGTCGTCCCTCTTATTGTGGGATACAAGGGTTCCAGCTCAATTGTCATGGAAACGAATCCCCTCGTATCCTGGTCGGGTCTCGGGGCTTTAATGTTGCGTGGATCGACCAATACGCGTACACGGTGAGAATGGTGCGAACAGACCTTGCTTTTCATAGTTGTTCTTCCGAATTAACCAACACTTCCTTGGGTGAGAGTAGTAGCCAATTCCAATATGGTGAAAATGTGAAGCGTGTGTCCGTATTCTATGACTGCTCCTCCTCGTACATTTCTACAGTTGGGGTTAGAAACTTCACATGCGAGGATACCTCTGGAACGCGTGTTTACTACGTGTCCGAAATGGAAGGTGATGTTGTGATGCGGCGATCCCCTGAACTTGAGCAGTGTAGATATATTCAAGTGCCGATTTCGGAGTCGGAGGAGAATGGTGTAGATGCTATTGCCGGCGGTATTGATGCGCTGAACAATTACTTGAAGCAAGGGTTTGATGTGCAGTATAGGATTGGAGACGGGGATCGCTGCTGGGACTGCGAAAATAGTAGTGGAATTTGTGGGAGTGTCACCACTAATGCGTCTCAATTCAACTGTCATTGCGAGGACGGACCTCATCATTCACACTGCAATGATTCTCCCCCTCATCATCGCAGTAGTCTCGTTGTCAAGGTCATAGTAGATATCATGGTAGCAATAGTTGTACTTGTAGCCACGGTAGCAGGAGTTGTACTTGTATGTTGCTGCCGGAAAATACAACTTTGGAAGACAACTAAGGCTGACCAAGAGATCGAGGCCTCCATAAGAAATCATGGACCTTTGGTTCTCACAAGATACAAATTCTCAGATGTGAAGAAAATgaccaaatccttcaaaataaaACTGGGAGAAGGTGGCTATGGTGCTGTATATAAAGGAGAGTTACTCAACGGCTGTCATGTGGCGGTTAAGATATTGTCTACATCCAAAGGGGATGGTCAAGACTTTATCAATGAGGTTGCTAGCATCAGTAGAACTTCCCATGTCAATGTTGTTAGCCTTCTTGGGTTCTGTTTGGAACGCCGAAAGAAGGCACTTATCTATGAATTTATGACTAATGGATCCCTTGACAGATTTATTGACAACAAGTTAAATGAATCTACTCAATCCTTAACTTTggaaaaattgtatgaaattgcAATTGGGATAGCTCGAGGACTTGAGTACTTGCACAGGGGATGCAACACTCGAATTCTACATTTTGACATAAAACCACATAACATTCTGTTGGATGAAAACTTTTGCCCCAAGATCTCAGATTTTGGACTTGCTAAGATTTGCCCTAGGAAAGAAAGCATCATTTCAATTTCAGAAGCAAGAGGAACTATAGGGTATGTGGCTCCAGAAATTTGGAATAGAAATTTTGGAGGAGTTTCTCACAAGTCTGATGTTTATAGCTATGGAATGATGCTACTAGACATAGTTGGGGAGCGAAAGAACATGAATGCTGAAGTTAGTTGTACAAGTGAGAAGTATTTTCCAGATTGGATTTACAGTAAACTTGAAGAGGGTAGTAGTTTGGTACCTAATGGGAAGACCAGCATAGAGGAACATGACATTGCAAAGAGAATGATTGTTGTGGGTCTATGGTGCATTCAAGCTTTTCCAATTCATAGACCTACCATAAGTAGAGTGATCGAAATGTTAGAAGGAAGTCTAGATTCATTGGAAATGCCACCAAAGCCTGTCATGTCTTCCCCTACCAGAATAGAAGCAGAATCTTCCACTACCACAACATGTTAG 1935 0.4207 MLCSNLEPQLPFLCSVQLMSEEHDGFHDCQGMFKCGNLDNLYYPFWSDTDDSYYGRPSYCGIQGFQLNCHGNESPRILVGSRGFNVAWIDQYAYTVRMVRTDLAFHSCSSELTNTSLGESSSQFQYGENVKRVSVFYDCSSSYISTVGVRNFTCEDTSGTRVYYVSEMEGDVVMRRSPELEQCRYIQVPISESEENGVDAIAGGIDALNNYLKQGFDVQYRIGDGDRCWDCENSSGICGSVTTNASQFNCHCEDGPHHSHCNDSPPHHRSSLVVKVIVDIMVAIVVLVATVAGVVLVCCCRKIQLWKTTKADQEIEASIRNHGPLVLTRYKFSDVKKMTKSFKIKLGEGGYGAVYKGELLNGCHVAVKILSTSKGDGQDFINEVASISRTSHVNVVSLLGFCLERRKKALIYEFMTNGSLDRFIDNKLNESTQSLTLEKLYEIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKICPRKESIISISEARGTIGYVAPEIWNRNFGGVSHKSDVYSYGMMLLDIVGERKNMNAEVSCTSEKYFPDWIYSKLEEGSSLVPNGKTSIEEHDIAKRMIVVGLWCIQAFPIHRPTISRVIEMLEGSLDSLEMPPKPVMSSPTRIEAESSTTTTC 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2181 644 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Sto8g2181 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Sto8g2181 644 Gene3D Transferase(Phosphotransferase) domain 1 415 623 - -
Sto8g2181 644 Pfam Wall-associated receptor kinase C-terminal 174 255 IPR032872 -
Sto8g2181 644 ProSiteProfiles Protein kinase domain profile. 340 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2181 644 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 19 641 - -
Sto8g2181 644 SUPERFAMILY Protein kinase-like (PK-like) 325 614 IPR011009 -
Sto8g2181 644 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 641 IPR045874 GO:0004672
Sto8g2181 644 Pfam Protein tyrosine and serine/threonine kinase 343 613 IPR001245 GO:0004672|GO:0006468
Sto8g2181 644 Gene3D Phosphorylase Kinase; domain 1 302 414 - -
Sto8g2181 644 SMART serkin_6 340 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2181 644 Pfam Wall-associated receptor kinase galacturonan-binding 29 99 IPR025287 GO:0030247
Sto8g2181 644 MobiDBLite consensus disorder prediction 621 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2181 Sto-Chr8 14368148 14371132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2181 29 626 Receptor kinase-like Gene Family AT5G38260 39.868 4.92e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto8g2181 PK_Tyr_Ser-Thr 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2181 - - gmx:100816285 616.69