Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2178 atgaatgGTGAAGAGAATCCTTTTCCATCATTTTTGATATATGTGAGCTCGCGAAGCGACTTACCTAAACCTCCCTGGCACTTAGCCATGGAAGCACATATATTGTTGTTGTGTACAACTTCCACCATCTTCACCATCTCCTTCTTTCTCATTACATCTCTTCCAAAATCCTACTCTCAAGAACAAGACGGCTACAAAAATTGCAAGGGCCTATTCAAATGTGGGAATCTGGATAACTTGTATTACCCTTTCTGGTCAGACAATTCTAATCGATCCTCTTATTGTGGGAGAGAAGCGTTTGAGCTCTATTGTCGTGAAGACCAATCCCCTTGGATTTGGGTGGGGTCTCAAAACTTGAGTGTTAAGTGGATAGACCCTAACCCATACGCTTACAGGGTGAGAATGGTGCGGCCACACCTTGCTTTTCATAATTGTTCTTCCGAATTAACCAACACTTCCTTGGGTGAGAATACGGTGGGTGTGACTACCCAATTCAGTCACTTCCAATATGGTGAACATGTGAAGCGTGTGTCCGTATTCTACGACTGCTCCTCCTCGTACATTTCTAGTGTTGGGGTTGGGGTTAGAAACTTCACATGCGAGGATACCTCTAGAAGGCGTGTTTACTATGTGTCCGAAACGGAAGGTGATGTTCTGATGCAGCGATTCCCTGAACTTGAAAAGTGTAGATATATTCAAGTGCCGATTTCAGAGTCAGAGGAGAATGGTGTAGATGCTGTTGGTGGTGGTATTGATGCGCTGAACAATTACTTGAACCAAGGGTTTGATGTGGAGTATATTATTGGAGACGGGAATCACTGCTCAAATTGCGAGGCTACTCGTGGAGTGTGCGGGAGTGAGAGGTATCGTGCGTCTCAATTCAGCTGTTATTGCCAGGACGGATTTCATTATTCAGACTGCAATGACAATGATTCCCTCACTCATCCTAGTACTCTCGCTGTCAAGAACAAAGTCATAGCAGGTATCACGGTAGGAGTAGTTGTAGCCGCACTTATAGTTTGCTGTTgcaaaatcaaatatttaatgcggaaaataaaaatttggaagACAACTAAGGCTGACCAAGAAATCGAGGCCTTCGTAAGAAATCATGGACCTGTGGCTCTCACAAGATACAAATTCTCAGATGTGAAGAAAATGACCAAATCCTTCAAAGTTAAACTGGGTGAAGGTGGTTATGGTGCTGTATATAAAGGAGAATTACTCAACGGCTCTCATGTGGCGGTTAAGATATTGACTGCATCCAAAGGCAATGGTCAAGACTTTATCAATGAGGTTGCTAGCATCAGTAGAACTTCCCATGTCAATGTTGTTAGCCTTCTTGGGTTCTGTTTGGAAGGCCAAAACAAGGCCCTTATCTATGAATTTATGCCTAATGGATCCCTTGACAGATTTATTGACAACAAGGTAAATGAATCTACTCCATTATCCTTAAATCTggaaaaattgtatgaaattgcGATTGGGATAGCTCGAGGGCTTGAGTACTTGCACAGAGGATGCAACACTCGGATTCTACATTTTGACATAAAGCCACATAACATTCTGTTGGATGAAAACTTTTGCCCCAAGATCTCAGATTTTGGACTTGCTAAGATTTGTCCTAGGAAACAAAGCATCATTTCAATTTCAGAAGCAAGAGGAACTATAGGGTATGTGGCTCCAGAAATTTGGAATAGAAATTTCGGAGGTGTTTCTCACAAGTCTGATATTTACAGCTATGGAATGATGCTACTAGACATAGTTGGGGAGCGAAAGAACATGAATGCTGAAGCTAGTTGTACAAGTGAGAAGTATTTTCCAGATTGGATTTACAGTAAACTTGAAGAGGGTAGTAGTTTGATACCTAATGGGATGACCAGCATAGAGGAACATGACATTGCAAAGAGAATGATAGTGGTGGGTCTATGGTGCATTCAAGCTTTTCCAATTCATAGACCTACTATAAGTAGAGTGATCGAAATGTTAGAAGGAAGTTTAGATTCACTGGAAATTCCACCAAAGCCTGTCATGTCTTCCCCTACCAGAATAGAAGCAGAATCTTCCACTACCACAACATGTTAG 2085 0.4086 MNGEENPFPSFLIYVSSRSDLPKPPWHLAMEAHILLLCTTSTIFTISFFLITSLPKSYSQEQDGYKNCKGLFKCGNLDNLYYPFWSDNSNRSSYCGREAFELYCREDQSPWIWVGSQNLSVKWIDPNPYAYRVRMVRPHLAFHNCSSELTNTSLGENTVGVTTQFSHFQYGEHVKRVSVFYDCSSSYISSVGVGVRNFTCEDTSRRRVYYVSETEGDVLMQRFPELEKCRYIQVPISESEENGVDAVGGGIDALNNYLNQGFDVEYIIGDGNHCSNCEATRGVCGSERYRASQFSCYCQDGFHYSDCNDNDSLTHPSTLAVKNKVIAGITVGVVVAALIVCCCKIKYLMRKIKIWKTTKADQEIEAFVRNHGPVALTRYKFSDVKKMTKSFKVKLGEGGYGAVYKGELLNGSHVAVKILTASKGNGQDFINEVASISRTSHVNVVSLLGFCLEGQNKALIYEFMPNGSLDRFIDNKVNESTPLSLNLEKLYEIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKICPRKQSIISISEARGTIGYVAPEIWNRNFGGVSHKSDIYSYGMMLLDIVGERKNMNAEASCTSEKYFPDWIYSKLEEGSSLIPNGMTSIEEHDIAKRMIVVGLWCIQAFPIHRPTISRVIEMLEGSLDSLEIPPKPVMSSPTRIEAESSTTTTC 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2178 694 Pfam Protein tyrosine and serine/threonine kinase 391 663 IPR001245 GO:0004672|GO:0006468
Sto8g2178 694 SUPERFAMILY Protein kinase-like (PK-like) 374 664 IPR011009 -
Sto8g2178 694 ProSitePatterns Protein kinases ATP-binding region signature. 395 417 IPR017441 GO:0005524
Sto8g2178 694 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 40 691 - -
Sto8g2178 694 ProSiteProfiles Protein kinase domain profile. 389 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2178 694 Gene3D Phosphorylase Kinase; domain 1 351 463 - -
Sto8g2178 694 PANTHER RUST RESISTANCE KINASE LR10-RELATED 40 691 IPR045874 GO:0004672
Sto8g2178 694 Pfam Wall-associated receptor kinase C-terminal 200 301 IPR032872 -
Sto8g2178 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Sto8g2178 694 SMART serkin_6 389 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2178 694 Gene3D Transferase(Phosphotransferase) domain 1 464 672 - -
Sto8g2178 694 ProSitePatterns EGF-like domain signature 2. 296 307 IPR000742 -
Sto8g2178 694 Pfam Wall-associated receptor kinase galacturonan-binding 68 128 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2178 Sto-Chr8 14357903 14360945 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2178 39 676 Receptor kinase-like Gene Family AT5G38260 38.354 4.79e-146 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto8g2178 PK_Tyr_Ser-Thr 4.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2178 - - gmx:100816285 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2178 8 14357903 14360945 Sto8g2178 8 14357903 14360945 ECH