Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2176 ATGAACACTTATCCTatattcctcttcttcttcatcatcttcttcttcttattaattACTTTGCCTCAATCTTACTCCCAAGAAAATGACACATCATATTCTATGTGTAGCCAACCATACAATTGTGGATCCCTCACAAACATCTCCTACCCTTTCTGGGGGCAGAATCGGCCCGATTATTGCGGTGCCTCTGGGTTCCAACTCGAGTGTCACAATAATCAAAACACTACAATCCAATCTTCCTCACAAGTTTTCAATGTACTTCACATCAACCAAACTGATTTTACCATGAGACTTGTGCTGCAAGACTTTGCCTATGATGTTTGTCCTCCCAATGGAACCAACACTACTTTGAGTGGCACCCCCTTTCGGTTTCTCCCAAATGTTGGGAACATGAGTATATTCTATGATTGTCCCTCCCAGGTTTCTGGAGTGAACAACTTTACCTGTGGGAATGATTCTAGTAAGCTTGGTTTCTATGTGAGGGGGAATGAGTTGGAGGAATTCCCAGGATATGAGGAGTGTGGGTTTGGTATTCAAGTGCCAGTTTTGGAGGATAATAGTACTAGTGTGGAGGATTCTCTGAAGAAGGTTCTGGAAGAAGGGTTTGATGTGATGTATGATGCTTCTGATGAGTGTACAACATGTAGGGATTCTGGAGGATTGTGTGGGACTTCTCAGAATGATGGCTCTGTGTTTTCTTGTTATTGTCATGATGGAGCTCATGGTTCTTCCTGTTCTACTCACAACAGTCGAAAGAACAAAATACTGAAGCTAGTTTTAGCTTTTGTAGGTACTGCAATTGGACTACCTCTCATAGCTGTCACCATATgcagaaacaaagaaagaataTGGAGGATGTTAAAAACCCAATTTGGAAAGAAGAATGATGATGATAAGGACATAGAATCCTTCCTTCAAAGTCAGGGTCCTCTGCCTCTTAAAAGGTACACCTTCTCGGATGTGAAGAAAATGACTGACTCCTTCAAACATAAATTGGGAGAAGGTGGCTATGGTTCTGTTTACAAAGGGAAACTACTCGCAGATCAATACGTAGCCGTAAAGCTCTTGAATGAATCCAAAGGGAACAGTGAAGAATTCATCAATGAGGTTGCTAGCATCAGCAAAACCTCCCATGTTAATGTTGTCACCCTTCTTGGGTTTTGTTTAGAAGGACGAAGAAAAGCTCTTGTTTATGAATTCATGTCTAATGGCTCTCTCGAGAAGTTCATTTACAAGAAGCAGAAGGAGTCAGATGAAACTCCCCCTCCTTCCTTGAGTTGGGAGAATTTGTATGAAATCGCATTAGGCATAGCTCGCGGGCTTCAGTACTTGCACAAAGGATGCAATACTCGGATTTTGCATTTTGACATCAAGCCTCATAACATTCTTCTGGATGAGAAGTACCAACCGAAGATATCGGATTTCGGGCTTGCTAAGCTCAATCATAACAAGGAAGAGAGCATTATTTCGATGTCGAATGCGAGAGGGACAGTTGGGTATGTGGCTCCAGAAGTGTGGAACAAAAGTTTTGGGGGAGTTTCACACAAGTCAGATGTGTATAGTTATGGAATGATGCTGCTAGAAATGGTGGGAGGGCAAAAGCTTGCTAATGTTGAAGCAAGCACTAATGGAACAGATAGTGAGAAGTATTTTCCTCATTTGGTGATTTACAAGAAGCTTGAGGAGGGAAATGAATTGGTAGTTGATGGGGTAATGAGATcagaggaaaatgagattgcAAAGAAGATGACAATGGTGGGATTGTGGTGTATTCAGACAATTCCTGCTCATAGACCTACCATAAGTAGGGTTATTGAAATGTTGGAAGGTGGTATGGAGGTTTTAGAAATGCCACCAAAGCCTATTCTGTCTTCTCCTTCAAGATCAACACCAGAATCTTTCTCCACCTTAAGTTCATTTCAAAGTGTTTATAGTTCTAAACTGAACCACGAGGTCTAG 1962 0.4011 MNTYPIFLFFFIIFFFLLITLPQSYSQENDTSYSMCSQPYNCGSLTNISYPFWGQNRPDYCGASGFQLECHNNQNTTIQSSSQVFNVLHINQTDFTMRLVLQDFAYDVCPPNGTNTTLSGTPFRFLPNVGNMSIFYDCPSQVSGVNNFTCGNDSSKLGFYVRGNELEEFPGYEECGFGIQVPVLEDNSTSVEDSLKKVLEEGFDVMYDASDECTTCRDSGGLCGTSQNDGSVFSCYCHDGAHGSSCSTHNSRKNKILKLVLAFVGTAIGLPLIAVTICRNKERIWRMLKTQFGKKNDDDKDIESFLQSQGPLPLKRYTFSDVKKMTDSFKHKLGEGGYGSVYKGKLLADQYVAVKLLNESKGNSEEFINEVASISKTSHVNVVTLLGFCLEGRRKALVYEFMSNGSLEKFIYKKQKESDETPPPSLSWENLYEIALGIARGLQYLHKGCNTRILHFDIKPHNILLDEKYQPKISDFGLAKLNHNKEESIISMSNARGTVGYVAPEVWNKSFGGVSHKSDVYSYGMMLLEMVGGQKLANVEASTNGTDSEKYFPHLVIYKKLEEGNELVVDGVMRSEENEIAKKMTMVGLWCIQTIPAHRPTISRVIEMLEGGMEVLEMPPKPILSSPSRSTPESFSTLSSFQSVYSSKLNHEV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2176 653 SMART serkin_6 327 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2176 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Sto8g2176 653 ProSiteProfiles Protein kinase domain profile. 327 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2176 653 Gene3D Transferase(Phosphotransferase) domain 1 402 617 - -
Sto8g2176 653 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 1 638 - -
Sto8g2176 653 ProSitePatterns EGF-like domain signature 1. 235 246 IPR000742 -
Sto8g2176 653 SUPERFAMILY Protein kinase-like (PK-like) 305 609 IPR011009 -
Sto8g2176 653 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Sto8g2176 653 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 638 IPR045874 GO:0004672
Sto8g2176 653 Pfam Protein kinase domain 330 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2176 653 Gene3D Phosphorylase Kinase; domain 1 290 401 - -
Sto8g2176 653 Pfam Wall-associated receptor kinase C-terminal 162 240 IPR032872 -
Sto8g2176 653 Pfam Wall-associated receptor kinase galacturonan-binding 36 100 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2176 Sto-Chr8 14347194 14349782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2176 14 646 Receptor kinase-like Gene Family AT1G66910 39.222 2.07e-142 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto8g2176 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2176 - - vra:106766588 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2176 8 14347194 14349782 Sto8g2176 8 14347194 14349782 ECH