Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2175 ATGCTCAACCTTAAATTCGTATGCTTTCTTGTTCCTCTGTTTCTcttcttcctcaattcctctgcCACCAACTCTACAATCTGTCCCACCGACAATTGCCTCATTGGCCCTCAAATCCGATACCCCTTTTGGCTCTCCCAAGGATCCTCTCCTCCACAGCTCTGTGGCTACCAAGAATTTTCCTTCTTGTGCGTTAGTGGCTACACCATCTTTTCTCCGCCTCCTGGAAGATACTACTATGTAAAACACATCAACTATAATAATCAGAGCATTCACCTCGTTGATTTTGACACTGCAAATGAAACATGTCCGAGGGCACTCCACGATTTCCCCTTTGGTACTTTACCCCTCTCTCACTCCCCTTTGAATATGGACATTACGTTTTACTACAATTGCAGTTCTTACCCCTCCGGTGTGACGCCCATAAGGTGTTTGACGTCTGGTCTGAAAGAGTCTTTTGTGTTTGTGGCGGGGAATGAGACTAGTGGGTTTGATTGGTCCAAGAATTGTGAAGAGAAAGTATCGGTGGCTGTGTTGAAGGATCAGATTACGAGTGGTGGGTTGATGGAGGAGTTCGTTGGAGCCTTGAATGAAGGGTTTGTGCTTGATTGGCAAACGCCTGAGAGCTGTGATGAGTGTGAGGCTTCTGATGGGCTTTGTGGTTACAGTGATGACACAAAGGGGATGCTGTGCTTCTGCAAGGATGGTAGCAATAGCTGCTCTGGGAGAGGCAAGACCCGTTTGTCAAAGCTAACAATTGGTTTAATAGCTGGAGGAATTGGAGCTTTGCTGATGAtatgcatcattatcatctgtTTAAGACGTAAATTGTTGTCAATTCTGTCAGAAAAGTTTGGGAAGAAGACAAAGAATGATCAAGACATAGAGGCCTTCATGAGAAACCAAGGACCTCTGTCCATAAAAAGATATACATTCTCTGAAATCAAGAAAATGACCAATTCTTTCCAAGTGAAATTGGGAGAAGGAGGTTATGGTAGCGTATACGAAGGAAATACAGGCAATAATTGTCCTGTGGCTGTGAAGGTATTGAATGCATCCAAGGGGAATGGTGAAGAATTCATCAATGAGGTTTTGAGCATCAGTAGGACTTCTCATGTAAATATTGTTTCTCTCCttggtttttgttttgaaaGCGACAGAAAAGCACTTGTGTATGAACTTATGCCCAATGGATCACTTGAAAAGTACATACACAAGAGAGATCTTGACACAAATCCACCCTTGAGCTGGGAAAGATTGCTCCAAATTGCAGAAGGAATAGCTAAAGGGCTAGAATACTTGCACAGGGGTTGCAACACTAAGATTCTGCATTTTGACATAAAACCAAACAATATCCTTTTGGATAAAAACTTCTGCCCAAAAATCTCAGATTTTGGGCTGGCTAAGCTCTGCTCGAAAACACACAGTATCGTCTCGATGTTGGATGCCAGAGGGACATTAGGGTATATAGCTCCAGAAGTATGGAACCGAAACATCGGAGGAGTCTCACATAAGTCCGATGTCTACAGTTACGGAATGCTGGTTttggaaatggtgggaggaagACAGAATTTCAACAGAGAAGTTGGAGATTTAAGTGATACATATTTTCCTCATTGGGTATACAGACAGATTGAGTTGGAAAACAATGAAGAACTGTATGGAGCCATGACTGAAGATGAACAAGAAATTGCCAAGAAAATGATTATAGTGGGATTGTGGTGCATACAGACAAATCCATCAGATAGGCCTCCCATGAATAGGGTGATTGAGATGTTAGAAGGGAGTCTAGAACAACTCCAAATACCACCAAAGCCTTTCATATTTAATCCTGCAATAACTGAAAGGGAGTATTGTGATACTGCTAATCTTGTTTCAGTTTCCTCTGAGTATCAATATGGTAGATAG 1908 0.4067 MLNLKFVCFLVPLFLFFLNSSATNSTICPTDNCLIGPQIRYPFWLSQGSSPPQLCGYQEFSFLCVSGYTIFSPPPGRYYYVKHINYNNQSIHLVDFDTANETCPRALHDFPFGTLPLSHSPLNMDITFYYNCSSYPSGVTPIRCLTSGLKESFVFVAGNETSGFDWSKNCEEKVSVAVLKDQITSGGLMEEFVGALNEGFVLDWQTPESCDECEASDGLCGYSDDTKGMLCFCKDGSNSCSGRGKTRLSKLTIGLIAGGIGALLMICIIIICLRRKLLSILSEKFGKKTKNDQDIEAFMRNQGPLSIKRYTFSEIKKMTNSFQVKLGEGGYGSVYEGNTGNNCPVAVKVLNASKGNGEEFINEVLSISRTSHVNIVSLLGFCFESDRKALVYELMPNGSLEKYIHKRDLDTNPPLSWERLLQIAEGIAKGLEYLHRGCNTKILHFDIKPNNILLDKNFCPKISDFGLAKLCSKTHSIVSMLDARGTLGYIAPEVWNRNIGGVSHKSDVYSYGMLVLEMVGGRQNFNREVGDLSDTYFPHWVYRQIELENNEELYGAMTEDEQEIAKKMIIVGLWCIQTNPSDRPPMNRVIEMLEGSLEQLQIPPKPFIFNPAITEREYCDTANLVSVSSEYQYGR 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2175 635 CDD STKc_IRAK 326 595 - -
Sto8g2175 635 Pfam Wall-associated receptor kinase C-terminal 151 236 IPR032872 -
Sto8g2175 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Sto8g2175 635 Pfam Wall-associated receptor kinase galacturonan-binding 28 95 IPR025287 GO:0030247
Sto8g2175 635 Gene3D Transferase(Phosphotransferase) domain 1 395 603 - -
Sto8g2175 635 ProSiteProfiles Protein kinase domain profile. 320 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2175 635 PANTHER - 38 630 - -
Sto8g2175 635 Gene3D Phosphorylase Kinase; domain 1 292 394 - -
Sto8g2175 635 SMART serkin_6 320 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2175 635 Pfam Protein kinase domain 324 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2175 635 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Sto8g2175 635 PANTHER RUST RESISTANCE KINASE LR10-RELATED 38 630 IPR045874 GO:0004672
Sto8g2175 635 SUPERFAMILY Protein kinase-like (PK-like) 301 594 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2175 Sto-Chr8 14342574 14345789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2175 6 612 Receptor kinase-like Gene Family AT5G38260 40.094 7.88e-137 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto8g2175 Pkinase 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2175 - - gmx:100781977 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2175 8 14342574 14345789 Sto8g2175 8 14342574 14345789 ECH