Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2174 ATGGCCGCCAAACGCTTTCTTGATAATGATTCTGATCCTGATCATCATAAGCCCAACGACAAACGCATCAGAACTACCACCACTACTCGACCTTCTTTTGCCTCAATTATAGGAGAAGTTGTTATGGTCAAGAACATGCAGAACGTCTTTTCTAGCCTAGAGCCTCTCCTCAGAAGAgtgGTGACTGAAGAGGTGGAGCGAGTAATGAGACATTGTTATCCACCCCGTGCTATAACCCGCTCTCCTTCGTTACGAATCGAATCCGTCGGGCAGCCGCACTCGAATCTTTACCTAATGTTCACCAAACCCCTCTCTCTCCCGATCTTCACCGGGAGTCGGATCCTCGACGCCGACGGAAACACCATCCAGGTGGTGCTGGTGGAGAAGAATGGCGGTGATCATGTGGTTCGGACTAGTGTCCCTCATTCTATCAAGCTCGAGCTGGTGGTGCTCGACGGAGACTTCCCGGCGGCCGGGGACAAGGAGGCGTGGTGGACCACCGAGGAATTCAACGGCCGCATAGTGAAGGAGCGAGCCGGGAAGCGGCCACTGCTCACCGGAGAATTGAATCTTACCCTGAGGGATGGAATTGCACCCATTGGTGGGGACATTGAGTTCACCGACAATTCCAGCTGGATCCGTAGCCGGAAGTTTCGTGTCGGTGTCAGGGTGGCGCCGGGGGGTAGCGTGGGTGGTGTCCGGATTCGCGAAGGCTTCACGGAGGCGTTTATGGTGAAGGATCACCGTGGAGAATTGTACAAGAAACACCATCCGCCAATGTTGGAAGACGAAGTGTGGAGGTTAGAGAAGATTGGAAAAGATGGAGCTTTCCATAAGAAATTGTCTTCACATGGTGTTCACACAGTCCAAGATTTTCTCAAGTTGTCTATTTTAGGGATTGGAATGTCAGAAAAAATGTGGGAAGTGACAATGAAGCACGCAAGGACTTGTGAGATGGGGAACAAGCTCTACGTATACCGTGGTTCCAATTTTGCCATTTATTTGAATCCAATCTGTCAAATCATTAAAGCTCAGATAAATGGCATTCTTTATTGGGGCAAAGAAATTACCAATAACATGAATAAGACCTACATACACAAACTGTGGGGGGAAGCCTATTCAAGATGGGGCTGCTTGGAGGAAGTTGATGAAGTTTTGAATGATAACATCGCCTTGTTAACCCAAGGTGAAAGTAATGTGGAGCAATTTGGAAACAACAACCATCAAGCAACGTTATATGATGAGAACGATTTCTTTGGTGAAAAATGCAGTGAAGTTAGCAGCTATGGAACAAACAatactaacaataataataatgcacAAATTGGTGGAGGAGGATGCAATAATAATGAGTGGACATTGAATCCAACATTCCTACCAGCACAATTCGTGAATGGCAATATTTCTTATAGCTTCTCCGACTCACAATCTGATGGAGACTTAACGCCTTCTGATCACGTGGCTGCAACTACGAGATGGCCTTAA 1485 0.4667 MAAKRFLDNDSDPDHHKPNDKRIRTTTTTRPSFASIIGEVVMVKNMQNVFSSLEPLLRRVVTEEVERVMRHCYPPRAITRSPSLRIESVGQPHSNLYLMFTKPLSLPIFTGSRILDADGNTIQVVLVEKNGGDHVVRTSVPHSIKLELVVLDGDFPAAGDKEAWWTTEEFNGRIVKERAGKRPLLTGELNLTLRDGIAPIGGDIEFTDNSSWIRSRKFRVGVRVAPGGSVGGVRIREGFTEAFMVKDHRGELYKKHHPPMLEDEVWRLEKIGKDGAFHKKLSSHGVHTVQDFLKLSILGIGMSEKMWEVTMKHARTCEMGNKLYVYRGSNFAIYLNPICQIIKAQINGILYWGKEITNNMNKTYIHKLWGEAYSRWGCLEEVDEVLNDNIALLTQGESNVEQFGNNNHQATLYDENDFFGEKCSEVSSYGTNNTNNNNNAQIGGGGCNNNEWTLNPTFLPAQFVNGNISYSFSDSQSDGDLTPSDHVAATTRWP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2174 494 MobiDBLite consensus disorder prediction 1 24 - -
Sto8g2174 494 PANTHER OS02G0177800 PROTEIN 1 487 IPR012416 GO:0005516
Sto8g2174 494 Pfam Calmodulin binding protein central domain 260 317 IPR046830 -
Sto8g2174 494 Pfam Calmodulin binding protein C-terminal domain 322 382 IPR046829 -
Sto8g2174 494 MobiDBLite consensus disorder prediction 1 27 - -
Sto8g2174 494 MobiDBLite consensus disorder prediction 474 494 - -
Sto8g2174 494 Pfam Calmodulin binding protein-like N-terminal domain 97 248 IPR046831 -
Sto8g2174 494 PANTHER PROTEIN, PUTATIVE-RELATED 1 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2174 Sto-Chr8 14335258 14339116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2174 3 383 Calmodulin-binding Proteins AT5G57580 46.701 2.81e-105 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2174 - - gmx:100802257 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2174 8 14335258 14339116 Sto8g2174 8 14335258 14339116 ECH