Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2167 CTGCAGAGCGAAAGGAGAGCAAGAAGCCCCAGCCCAGGCAGCAGATCTATCAGGACTTGCAACTTCCAAAGAGTTGTGAAGATGTACACATCAAGGAAGAAAATCCACAAGGATAAGGATGCTGAACCAACTGAGTTTGAAGAGTCAGTTGGTCAGGCATTGTTTGATTTGGAAATTACTAACCAGGAGCTGAAAAGTGATTTGAAAGATCTCTACATAAATTCAGCAATCCAAATTGATGTATCTGGGAACCGCAAGGCTGTGGTTATTCATGTCCCCTACAGATTAAGGAAGGCTTTCCGTAAGATTCATGTTAGGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGAAAGGATGTAATCTTGATTGCTACCCGGAGGATCTTGAGGCCTCCAAAGAAGGGTTCTGCTGTGCAGCGTCCTCGCAGCCGTACACTCACTGCTGTGCATGAGGCAATGTTGGAGGATGTTGTATTGCCTGCCGAGATTGTTGGGAAACGTGTTAGGTATCGTGTTGATGGATCCAAGATTATGAAGGTATTCTTGGACCCTAAGGAGCGAAACAACACTGAGTACAAGCTTGACACTTTTACTGCAGTATACAGGAAGCTTTCGGGCAAGGATGTTGTGTTTGACTATCCCATCGCAGAGCCATAG 657 0.4536 LQSERRARSPSPGSRSIRTCNFQRVVKMYTSRKKIHKDKDAEPTEFEESVGQALFDLEITNQELKSDLKDLYINSAIQIDVSGNRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLDTFTAVYRKLSGKDVVFDYPIAEP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2167 218 Pfam Ribosomal protein S7e 34 213 IPR000554 GO:0003735|GO:0005840|GO:0006412
Sto8g2167 218 PANTHER 40S RIBOSOMAL PROTEIN S7 18 218 IPR000554 GO:0003735|GO:0005840|GO:0006412
Sto8g2167 218 PANTHER 40S RIBOSOMAL PROTEIN S7 18 218 - -
Sto8g2167 218 ProSitePatterns Ribosomal protein S7e signature. 106 119 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2167 Sto-Chr8 14239230 14241705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2167 28 217 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.947 1.95e-112 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2167 K02993 - gmx:100527680 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2167 8 14239230 14241705 Sto8g2167 8 14239230 14241705 ECH
Sto8g2167 8 14239230 14241705 Sto10g0550 10 4600925 4602115 ECH