LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g2137	ATGATCCTTTGGACGCTCCTATTCATCCTATCCACCGCCACAATACTACGTCGTTTGAAGCAAATCAAACACGACCATCAGAAACAACGACCGCCAGGTCCACCGGCCTGGCCAGTCATCGGTAACCTCCACTTGTTGGGTAAACTCCCACATCGGAGCCTCCAAACCCTATCCAACAAATACGGATCCATCATGTCCTTACGCTTAGGCCAAGTACACACCCTCGTCATATCCTCCGGCGAAGCCGTCGAGCTATTACTCAAGACGAACGACACCGTTTTTGCCAGCCGCCCCAAGTCTCAAGCCTCCGATATAATGTCGTATGGCTCAAAAGGGTTTGCGATTTCAGAGTATGGTCCTTATTGGCGCAACATGAGGAAACTGTGCACCTTACATCTCCTGAGTGCGTCCAAGGTTGAGTCGTTCGAGGGTTTGAGGAGGGAGGAGTTGGGGCGGGTGGTGGAGTCGCTGGAGAGAGCTGCGGCGGCGCGTGAGATAGTGGACGTGACGCGAGTGGTGACGAATCTGATTGAGAGAATAGTGTATAGGATGGTATTGGGTGCGGACAAGGATGAGGAATATGGTTTGAAGGAGGCTATTCACGAGGGATTGAGGCTGGCTGGAGTTTTTAATTTAGCAGATTTTGTTCCTTGCCTTGCTCGATTGGATCTTCagGGACACAAACGCAATAGTAAGAAACAAAGTAAAGTATTAGATGACGTATTGGAGAAAATAATAAAGGAGCATGAAGAGGCTATTAATAGTAACACACAAAAAGGCCGACAAGAAGACTTCATAGACATATTGCTTTCATTGATGCACCACTCTATCGATGGACAAGACTATGGGATTGATCGAACCAACGTTAAGGCAATTTTACAAGACATGATTGCTGGGTCATTCGAAACTTCTTCAAGTACTGTCTTGTGGGCTTTATCTTCGCTCTTAAGGAACCCAAGAGTGATGAAAACCCTACAACACGAACTAGACACAGTGATTGGAACGAAGAGAATGGTGGATGAGATTGATTTGTCGAAGCTGAGTTATTTAGAAATGATGATCAAGGAGACATTTAGATTATATCCTGCTGGAGCATTTATCCCTCGAGAATCCACCAAGGATGTCATGGTTGATGGTTATGGTTACTATATAAAGAAAGGTACAAGAGTTTTGATAAACTTGTGGGCAATAGGAAGAGATCCTAAAGTATGGTCTGATGATGCTGAAACGTTTTGTCCAGAGAGATTTAAGGACAAAGATATGGACTTTCGGGGACTTGAGTACTTTGAGTTTATACCATTTGGATTAGGTCGAAGAGGATGTCCTGGGATGAACTTGGGCCTAATTACAGTTAAGATTGTTTTGGCTCAGTTAATTCATAGCTTTAATTGGGAGCTTCCACTGGGTTTGAGCCCTAATGACTTAGACATGAGTGAGTGTTTTGGACTCTCACTTCCTCGAGCCAAGAACTTGCTGGCTGTGCCAACTTCTCATACTATATag	1503	0.4478	MILWTLLFILSTATILRRLKQIKHDHQKQRPPGPPAWPVIGNLHLLGKLPHRSLQTLSNKYGSIMSLRLGQVHTLVISSGEAVELLLKTNDTVFASRPKSQASDIMSYGSKGFAISEYGPYWRNMRKLCTLHLLSASKVESFEGLRREELGRVVESLERAAAAREIVDVTRVVTNLIERIVYRMVLGADKDEEYGLKEAIHEGLRLAGVFNLADFVPCLARLDLQGHKRNSKKQSKVLDDVLEKIIKEHEEAINSNTQKGRQEDFIDILLSLMHHSIDGQDYGIDRTNVKAILQDMIAGSFETSSSTVLWALSSLLRNPRVMKTLQHELDTVIGTKRMVDEIDLSKLSYLEMMIKETFRLYPAGAFIPRESTKDVMVDGYGYYIKKGTRVLINLWAIGRDPKVWSDDAETFCPERFKDKDMDFRGLEYFEFIPFGLGRRGCPGMNLGLITVKIVLAQLIHSFNWELPLGLSPNDLDMSECFGLSLPRAKNLLAVPTSHTI	500

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g2137	500	SUPERFAMILY	Cytochrome P450	31	493	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	7	498	-	-
	Sto8g2137	500	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	434	443	IPR017972	GO:0005506\|GO:0016705
	Sto8g2137	500	Gene3D	Cytochrome P450	15	494	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	E-class P450 group I signature	58	77	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	E-class P450 group I signature	82	103	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	E-class P450 group I signature	288	305	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	E-class P450 group I signature	308	334	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	E-class P450 group I signature	393	417	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	E-class P450 group I signature	431	441	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	E-class P450 group I signature	441	464	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	7	498	-	-
	Sto8g2137	500	Pfam	Cytochrome P450	31	490	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	P450 superfamily signature	299	316	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	P450 superfamily signature	352	363	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	P450 superfamily signature	432	441	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto8g2137	500	PRINTS	P450 superfamily signature	441	452	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g2137	Sto-Chr8	14015706	14018434	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g2137	1	495	Cytochrome P450	AT5G07990	39.010	8.43e-116	349

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g2137	-		-	gmx:100782181	578.556

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto8g2137	8	14015706	14018434	Sto8g2137	8	14015706	14018434	ECH