Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2122 ATGGCAAGCCGACTAAAAGAAGATGAGAAGAATGAACGAATAATTCGAGGTCTTCTGAAACTTCAACCGAATCGCAGATGTATTAATTGTGGCAGCCTGGGACCACAATATGTGTGCACTAATTTCTGGACATTTGTTTGCATCAACTGTAGTGGAATTCACCGGGAATTTACACATCGAGTTAAATCAGTTTCAATGGCTAAATTTACTTCACAAGAAGTTATTGCACTTCAGGAAGGGGGAAATCAGCGTGCAAAGGAAATCTATTTTAAAGAATGGGATCCACAACGTCATTCTCTCCCTGATAGCAGTAATGTTGACAGGCTCCGGGACTTTATTAAGCATGTTTATGTGGACAGAAGATTTAGTGGTGAGAGGACCAATGACAAACCACCAAGAGTGAAGACGGGTGACAAGGATGACTTCTATGAAAACAAAAGAGTTGATACATATCAGGGAGGATCTAGAAGCCCCCCTTATGAGGAAACATATGAACGTCGTTACAGTGACAAGTCTAGTTCTGGTGGAAGAAGTCCTGGATATGATCAAGACACTAGGCAATATGGTGATTATAGGAAAAGCCCCGGTCGCCCTCCAATTATTAATGATTGGCGTCGTGAAGAAAGATTTAGTGATGGAAGGAAATTTGAAGATCATAGAATATCTGATGGACAATCACGTCCACCCGTTGTGCGGCCTGTTAGAGATATTTTGGGAGAAAATGTAGTACCTCTTCGAATAAGTGAACCTCCCAAAGCAAACAGTGGAAGGGCCAGTGATGGCTCTATACTCACACAGAGAACTGCATCTTCCAGTAGCTTGGCATCCAGCAATGGCAACACAGGAGAAGTTAAGCTTGAGACTACTAAGAGCCTTATTGATTTTGACGCTGAGCCAGAGCCTCCTGTGGCTCCAGCAGTTCCTCAAGCCCAACAAGCTACTGTGGCTCAAGCTGTTGTGCAGCCAGCAAATTCTAGTGATGCCAATTGGGCATCTTTTGATATTGCTCCTGGggcaaaagcaactcaaggtcCTTCAAAATCGAATCCACTTGAATCTGTGCTATCCCAATTGTCAATGCCAtcacctgctcctgctcctgtTTCTGAAATCCAAGGTGATCCAAATTGCAATACCCCTGGAATGAGGACAGCATCACCTCTAAATAATGCAGGTCAGTGGGCCAGtatgcagcagcagcagcagcagcaaccTGTGTTCCCTACCACTGTTAGTCAGCCTACGACTCAACAATTTAACCCATCAGTTGGTGGATCTTTGAATAATCAGCAATGGAGTGTATCCCCAGTGCCCACAATACAAGGGCATCAGAGCACACCAATGCCACATGCATCCCATCTTGTCTCTAAACCTGCCAATGAGATTAGTTCTAGTGTTGTTTCACAACCTTCAACAGTAGAAGCACAACCACCTGGAAGAAAAGAACTTCCTGAGGTATTTTTTGCTCCTCATTTTGATACTTAA 1485 0.4141 MASRLKEDEKNERIIRGLLKLQPNRRCINCGSLGPQYVCTNFWTFVCINCSGIHREFTHRVKSVSMAKFTSQEVIALQEGGNQRAKEIYFKEWDPQRHSLPDSSNVDRLRDFIKHVYVDRRFSGERTNDKPPRVKTGDKDDFYENKRVDTYQGGSRSPPYEETYERRYSDKSSSGGRSPGYDQDTRQYGDYRKSPGRPPIINDWRREERFSDGRKFEDHRISDGQSRPPVVRPVRDILGENVVPLRISEPPKANSGRASDGSILTQRTASSSSLASSNGNTGEVKLETTKSLIDFDAEPEPPVAPAVPQAQQATVAQAVVQPANSSDANWASFDIAPGAKATQGPSKSNPLESVLSQLSMPSPAPAPVSEIQGDPNCNTPGMRTASPLNNAGQWASMQQQQQQQPVFPTTVSQPTTQQFNPSVGGSLNNQQWSVSPVPTIQGHQSTPMPHASHLVSKPANEISSSVVSQPSTVEAQPPGRKELPEVFFAPHFDT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2122 494 MobiDBLite consensus disorder prediction 258 287 - -
Sto8g2122 494 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Sto8g2122 494 CDD ArfGap_AGFG 12 122 - -
Sto8g2122 494 MobiDBLite consensus disorder prediction 372 426 - -
Sto8g2122 494 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Sto8g2122 494 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Sto8g2122 494 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Sto8g2122 494 MobiDBLite consensus disorder prediction 438 494 - -
Sto8g2122 494 MobiDBLite consensus disorder prediction 337 426 - -
Sto8g2122 494 Gene3D Arf GTPase activating protein 2 133 IPR038508 -
Sto8g2122 494 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Sto8g2122 494 MobiDBLite consensus disorder prediction 342 363 - -
Sto8g2122 494 MobiDBLite consensus disorder prediction 199 225 - -
Sto8g2122 494 MobiDBLite consensus disorder prediction 438 475 - -
Sto8g2122 494 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Sto8g2122 494 MobiDBLite consensus disorder prediction 123 147 - -
Sto8g2122 494 MobiDBLite consensus disorder prediction 123 312 - -
Sto8g2122 494 PANTHER ARFGAP/RECO-RELATED 1 373 IPR044820 GO:0005096
Sto8g2122 494 PANTHER ARFGAP/RECO-RELATED 380 489 IPR044820 GO:0005096
Sto8g2122 494 PANTHER ARF GTPASE ACTIVATOR 380 489 - -
Sto8g2122 494 PANTHER ARF GTPASE ACTIVATOR 1 373 - -
Sto8g2122 494 SMART arf_gap_3 12 130 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2122 Sto-Chr8 13884981 13889471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2122 12 122 C2H2 Transcription Factor Family AT4G21160 35.043 8.56e-13 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2122 8 13884981 13889471 Sto8g2122 8 13884981 13889471 ECH