Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2119 ATGGCCCACACTACCCATGACGAATTACACACCGCCGTCAACTTCTCCCACCCACGGCGGTTCGCCACCAAGTTCAAATTTGCGCTCAGGGAAGCGCTGTTCCCCGACGACGATCCCTTCGGGAAGTCGACTGAAACGACGTCGTCCTCGCGGCCCTTGAAGAGAGTGGCCAGAGGCATCCAGTACTTCATTCCCATCTTCGAGTGGCTCCCGCGTTATAGTTTCCGTCTCTTTCTTTCGGACTTGCTCGCTGGCCTCACTATTACTAGTCTCGCTATTCCTCAAGGCATTAGTTATGCCAAATTGGCGCAACTCCCTCCCGTCATCGGCCTCTaTAGTGCGTTCGTTCCACCTATAATATACACCGTTTTCGGAAGCTCAAGACACGTGGCAGTTGGGACGGTAGCATCGTGCTCGTTGCTCATATATGACACTCTTTCGAAGGTGGCGTCGCCAGAAACGAACCAAGCATTGTACGTTAGTTTGGTTTTCACCGCCACTTTTATCACCGGCGTCTTCCAGACTGCTCTCGGTATTCTAAGGTTAGGGATATTGGTGGATTTCTTTTCGCATTCAACAATCACTGGCTTCATGGGAGGCACAGCTGTCATTCTAATTTTGCAGCAACTCAAGGGCGTGTTTGGCTTGAAACATTTTACCACTAAAACCAGCGTCCAAGCTGTCATCAAGGCTATTTGGGATAACAGACGTGACATAAGGTGGGAGACTACGGTTCTTGGTGTGGTCTTGCTGATTTTCCTGCAGGTCACTAGATACGTGAAAACCAGAAATTCAAAACTCTTTTGGGTACCCGCCCTAGCTCCCATCGTAACAGTAGTGGTTGCTGGTGTTTTCACCTACCTCGTCAAAGGCCAAAACCACGGAATTCAAATTgtGGGTCACCTGGATAGAGGCATCAATCCTTCCTCCATCAAGCTTTTAAACTTCGACTCCAAATATATCTCAGCGGTGCTCAAAGCTGGCATTATCACTGGAATTTTGTCCTTGGCgGAAGGGATCGCCATTGGAAGAAGCTTTGCTGTGATCGATAATACCCCTCATGATGGAAACAAAGAGATGATAGCATTTGGACTCATGAACCTATGCGGTTCTTTCTCTTCATGCTACTTGAcaagtgGGCCATTTTCGAAAACTGCAGTGAATTACAACGCAGGGTGTAAGACAGCCATGTCAAACTTGGTAGAAGCAGTGTTAATGGCACTCACACTTCAATTTCTAGCTCCTCTCTTTGGATACACTCCGCTTGTGGCCTTATCCGTCATTATCATTTCTGCAATGATCGGTCTCTTTGACTACGAGAAGATGATTCATCTCTTCAAAGTTGATAAGTTTGATTTCCTAATTTGCATGGCTTGTTTCTTTGGCGTTGCCTTCATAAGCATGGACATTGGCCTCCTATTAGCACTACTATACGTGGCTCGACCTGCCACGTGTAAGCTTGGGAAGTTACCAGACTCGGGTTTGTACCGTGACGTGGAACAGTATCCTACGGCATCATCAAGGGTTCATGGCGTTCTAGTTGTACAACTTGGTTCTCCTCTTTATTTTGCAAATGCCGTTTACGTCAAACAAAGGATTATGAGATATATCCGAAGTGAGGAGGCCTATGGAGATGCTATTGAGCAGGTTATACTCGATTTGTCAGGAGTGACATCCATTGATACAACTGGCATCGAAGGACTGTTGGAGACCAGAAGAGCCTTGGAGACAAATGATATACcgCTATCATTTGTAAATCCAAGACTGGCGGTGATGGAGAAGCTAATATTATCCAAGTTTGTGGAGAAACTTGGGAAGGATTCGTTCTATTTGACTTTGGATGATGCTGTGGTGGCTACTCAATATTCACTCCATAGACCCAAGAAAAATAAAGTTGATAATGATATTCCTGTctaa 1917 0.458 MAHTTHDELHTAVNFSHPRRFATKFKFALREALFPDDDPFGKSTETTSSSRPLKRVARGIQYFIPIFEWLPRYSFRLFLSDLLAGLTITSLAIPQGISYAKLAQLPPVIGLYSAFVPPIIYTVFGSSRHVAVGTVASCSLLIYDTLSKVASPETNQALYVSLVFTATFITGVFQTALGILRLGILVDFFSHSTITGFMGGTAVILILQQLKGVFGLKHFTTKTSVQAVIKAIWDNRRDIRWETTVLGVVLLIFLQVTRYVKTRNSKLFWVPALAPIVTVVVAGVFTYLVKGQNHGIQIVGHLDRGINPSSIKLLNFDSKYISAVLKAGIITGILSLAEGIAIGRSFAVIDNTPHDGNKEMIAFGLMNLCGSFSSCYLTSGPFSKTAVNYNAGCKTAMSNLVEAVLMALTLQFLAPLFGYTPLVALSVIIISAMIGLFDYEKMIHLFKVDKFDFLICMACFFGVAFISMDIGLLLALLYVARPATCKLGKLPDSGLYRDVEQYPTASSRVHGVLVVQLGSPLYFANAVYVKQRIMRYIRSEEAYGDAIEQVILDLSGVTSIDTTGIEGLLETRRALETNDIPLSFVNPRLAVMEKLILSKFVEKLGKDSFYLTLDDAVVATQYSLHRPKKNKVDNDIPV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2119 638 CDD STAS_SulP_like_sulfate_transporter 508 613 - -
Sto8g2119 638 SUPERFAMILY SpoIIaa-like 508 617 IPR036513 -
Sto8g2119 638 Pfam STAS domain 509 616 IPR002645 -
Sto8g2119 638 Pfam Sulfate permease family 78 458 IPR011547 GO:0016021
Sto8g2119 638 ProSiteProfiles STAS domain profile. 502 620 IPR002645 -
Sto8g2119 638 PANTHER SULFATE TRANSPORTER 3.5-RELATED 6 630 IPR030316 GO:1902358
Sto8g2119 638 TIGRFAM sulP: sulfate permease 65 616 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto8g2119 638 PANTHER SULFATE TRANSPORTER 6 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto8g2119 638 ProSitePatterns SLC26A transporters signature. 107 128 IPR018045 GO:0008271|GO:0008272
Sto8g2119 638 Gene3D STAS domain 481 623 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2119 Sto-Chr8 13862585 13866747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2119 12 628 Inorganic Solute Cotransporters AT5G19600 60.160 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2119 K17471 - gmx:100789107 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2119 8 13862585 13866747 Sto8g2119 8 13862585 13866747 ECH