Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2108 ATGGGCCTccccccaccaccaccaccgatCAATCAGCAAGATTCTTACTTCGCGGTGGAATTCGATACCCATTTCGACCCTTCGCTTGGGGACATCAATGGGAACCACATCGGAATCGATGTTGACAGCGTCGTCTCCGTGGCCTCCGTGGACGCCATTTCTAAGGGAATCAATCTGAAGAGTGGGAGAAAGATTAGTGTGTGGGTTGAATACAGAGACGCCGTGAAAATTGCTCGCGTCTGGGTTGGGCATTCCTCGGCTAAGCCTTCCAATCCCATCCTAATCGCTCAGATTGACCTTTCTCAGAAACTCAAGGAGTTTATGCACGTTGGCTTCTCTGCCTCCAATGGGAAAGGCTCAAGTATCCACATTGTTCATCATTGGCAGTTCAAAACTTTTGGGAGTCATGTGGATATGGATAcagaccaagaagaagaaggggattGCTTCTTTTGCTGTGATCAACTAGATCAGAATTCCACCTCACCTGCTCCATACATTGATTATGATGatgaaagtgaaaatgaaaccCATTACAataggagaagaaggaagatagAGGAAGCAGCTCTTGGGTTGGGAGGCATATCAGCAATTCTAGTCTCTGCATTGGTGATAAGCATTTTCTTGACAAAGAGATCAAAAAAGGgtacttccacttccaccattaataattatcaattccaaaccccaaaacttcCCTCAAGATTGTCACTATCTGAGATCAAATCAGCCACAATGGGGTTCAATAGAGACAGACTAGTTGGGGAAGGAGGATCAGCAAAAGTCTACAAAGGGTCTCTCCCACATGGAGGAGGAGATGTGGCAGTGAAGAGATTCTCAAGGGTAAACTGTAATTTCCCCAATCCCTTCACCACAGAGTTTGCCACAATGGTGGGTTGCTTAAGACACAAGAATCTAGTTCAGCTTCAAGGATGGTGCTGTGAAGGCTCAGAACTAGTCCTAGTCTATGAATACCTCCCCAATGGCAGCCTCAACAAAATCCTTCACAAGAACTACAACTCTTCTTTAATCCTCTCATGGAAGCAAAGGGTGAACATAGTGCTAGGAGTTGCTTCAGCACTCACCTATCTCCATGAAGAATGTGAGAGACAGATCATCCACAGAGATGTCAAGACCTGCAATATCCTTCTTGACTCAGACTTCAACCCAAAGCTTGGGGATTTTGGGCTAGCAGAGGTATATGAGCACAGTTCTAATTCTAACAACACCACGAGGAGGGAGGCTACATTACCTGCAGGAACCATGGGGTATCTAGCACCTGAGTATGTCTACTCTGGTGTGCCTACTGTGAAGACTGATGTGTACAGCTTTGGGGTGGTGGTGCTGGAGGTGGCCACAGGGAGGAGGCCAGTGGAAGATGATGGGACAGTGATTGTGGACTATGtgtggaggatgtgggagaggaGGAAGCTGATTGATGCAAGAGATGGGAGGCTGATGGGGAAGTTTGATGGGGTGGAGATGGAGAGGATGCTGATGGTGGGGCTGGCTTGTGTACATCCTGATTATGAGAGTAGGCCAAGGGTTAGGGATGTGGGGAGGATTTTGAAGGGAGAAGCTCCTCTTCCATGGTTGCCTCCAAGTAAGCCAAGGGTGAGGATTAGGCCTGTTTTGCCTAGTGATAATGAGGAAACGTTGGATGTTgtaggaattggaattggaataggAAGTAGACCCAGTACTGATGATGCTCAGTATTTGACACCTAGAAGCCAGTTTGGGTCAAAACGGCGGTGGCGGAGCATCGTCGTTGACTTCGAGTTCACCCAAAGGGCAGTGCTTATGTTCCCCAACGACACATAA 1827 0.4297 MGLPPPPPPINQQDSYFAVEFDTHFDPSLGDINGNHIGIDVDSVVSVASVDAISKGINLKSGRKISVWVEYRDAVKIARVWVGHSSAKPSNPILIAQIDLSQKLKEFMHVGFSASNGKGSSIHIVHHWQFKTFGSHVDMDTDQEEEGDCFFCCDQLDQNSTSPAPYIDYDDESENETHYNRRRRKIEEAALGLGGISAILVSALVISIFLTKRSKKGTSTSTINNYQFQTPKLPSRLSLSEIKSATMGFNRDRLVGEGGSAKVYKGSLPHGGGDVAVKRFSRVNCNFPNPFTTEFATMVGCLRHKNLVQLQGWCCEGSELVLVYEYLPNGSLNKILHKNYNSSLILSWKQRVNIVLGVASALTYLHEECERQIIHRDVKTCNILLDSDFNPKLGDFGLAEVYEHSSNSNNTTRREATLPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRRPVEDDGTVIVDYVWRMWERRKLIDARDGRLMGKFDGVEMERMLMVGLACVHPDYESRPRVRDVGRILKGEAPLPWLPPSKPRVRIRPVLPSDNEETLDVVGIGIGIGSRPSTDDAQYLTPRSQFGSKRRWRSIVVDFEFTQRAVLMFPNDT 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2108 608 Gene3D - 1 134 - -
Sto8g2108 608 ProSitePatterns Protein kinases ATP-binding region signature. 255 278 IPR017441 GO:0005524
Sto8g2108 608 Gene3D Phosphorylase Kinase; domain 1 208 326 - -
Sto8g2108 608 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 15 542 - -
Sto8g2108 608 SUPERFAMILY Protein kinase-like (PK-like) 229 523 IPR011009 -
Sto8g2108 608 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 141 IPR013320 -
Sto8g2108 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Sto8g2108 608 SMART serkin_6 249 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2108 608 PANTHER - 15 542 - -
Sto8g2108 608 Pfam Legume lectin domain 12 142 IPR001220 GO:0030246
Sto8g2108 608 ProSiteProfiles Protein kinase domain profile. 249 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2108 608 CDD STKc_IRAK 255 526 - -
Sto8g2108 608 Gene3D Transferase(Phosphotransferase) domain 1 327 528 - -
Sto8g2108 608 Pfam Protein kinase domain 250 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2108 Sto-Chr8 13791123 13793825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2108 1 581 Receptor kinase-like Gene Family AT5G42120 54.967 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto8g2108 Pkinase 2.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2108 - - qsu:111994576 727.628