Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2106 ATGAAGCAGGTGGTTGGAACGGTGGTGTCAAACAAGATGCAGAAATCAGTGGTGGTAGCTGTGGATAGATTATTCCACAACAAATTATACAATCGTTATATCAAACGCACCTCTAAATTTATGGCACATGATGAGAAAAATGCTTGTAACATTGGTGACCGTGTTCGACTGGATCCTTCCAGGCCTTTGAGCAAGCGTAAGCACTGGGTTGTTGCTGAAATTCTCAAGAAAGCACGAATATATGTTCCACCAACGGCACCTGTTGCTGATAATCCTAGCTCCAGCTCTCAAGCACCTTCTTCTTAA 306 0.4314 MKQVVGTVVSNKMQKSVVVAVDRLFHNKLYNRYIKRTSKFMAHDEKNACNIGDRVRLDPSRPLSKRKHWVVAEILKKARIYVPPTAPVADNPSSSSQAPSS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2106 101 Pfam Ribosomal protein S17 6 73 IPR000266 GO:0003735|GO:0005840|GO:0006412
Sto8g2106 101 TIGRFAM uS17_bact: ribosomal protein uS17 2 71 IPR019984 GO:0003735|GO:0005840|GO:0006412
Sto8g2106 101 Hamap 30S ribosomal protein S17 [rpsQ]. 1 76 IPR019984 GO:0003735|GO:0005840|GO:0006412
Sto8g2106 101 Gene3D - 1 96 IPR012340 -
Sto8g2106 101 PANTHER 37S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL 1 95 - -
Sto8g2106 101 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 95 IPR000266 GO:0003735|GO:0005840|GO:0006412
Sto8g2106 101 SUPERFAMILY Nucleic acid-binding proteins 2 88 IPR012340 -
Sto8g2106 101 PRINTS Ribosomal protein S17 family signature 20 43 IPR000266 GO:0003735|GO:0005840|GO:0006412
Sto8g2106 101 PRINTS Ribosomal protein S17 family signature 52 62 IPR000266 GO:0003735|GO:0005840|GO:0006412
Sto8g2106 101 PRINTS Ribosomal protein S17 family signature 62 69 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2106 Sto-Chr8 13774669 13775141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2106 6 75 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 39.726 2.35e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2106 K02961 - rcu:8268720 163.696