Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2104 ATGGAGCACAACACCAACAACAACGTGATAGCTCCGTTCGTGATAAAGACATATCATATGGTGAACGATCCCACCACCGATACTCTCATCACTTGGGGAAGAGGTAACAATAGCTTCATCGTCTTCGACCCTCTCCATTTCTCTAACCGAATCCTCCCTGCCTATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAGCTCAATACCTATgggttCAAGAAGGTAGATCCGGATCGGTGGGAGTTTGCGAACGAGTGGTTTCTGCGAGGGCAGAGGCAGTTGTTGGTGAATATTGTGAGGAAGAAGCAGAGTAAGAGTAGTGGTGTGAAGCATGAGGAGGAATTGATGATGGAGGAGGAAGTGATAGTGATGGAGATAGCGAGGCTGAGGGAGGAGCAGAAGGCGTTGGAGAAGGAGATGGAAGGGATGCATAAGAGATTGGAAGCTACGGAGAGGAGGCCACACCAGATGATGGCTTTTCTCTGCAAAGTCGTCGAGGATCCCGATGTTGTCTCCCGCGTCTTGCTCGAGAGAGAACGAAGGCACTTGATGGCCGCGGACAAGAAGCGCcgcttcttgtcctcttcctcCGCCACGACCGCCACaacctcctcttcttcttcctccggcATGGCCGTGAAGACGGAAATGGAGGAGGACGACGCGACCGCGGGAGGTATCATTTCTTCTTCGTCGCCGGAGTTGGATTATTTTTGCCGGGCGCAGGAAACCATCGTTGGCCTCGATACAGTATCGGACTGGTGGGGGCAGAGGCAGGCGGGGGACGGTGGCGCCGATGTTCCTACACCGTTCACGGCGTGGCCGGCTCTGGGAGGGGGCGAGAGTAGTAGTAGTGAGGGGCAAATGAGGTATTTTGTGGAAATGGCAACGGAGAGTAGTCCGCCGCCGCCTTATCCGTTTTCGCTGTTGGAGGGTGGCTTTTAG 948 0.5116 MEHNTNNNVIAPFVIKTYHMVNDPTTDTLITWGRGNNSFIVFDPLHFSNRILPAYFKHNNFSSFVRQLNTYGFKKVDPDRWEFANEWFLRGQRQLLVNIVRKKQSKSSGVKHEEELMMEEEVIVMEIARLREEQKALEKEMEGMHKRLEATERRPHQMMAFLCKVVEDPDVVSRVLLERERRHLMAADKKRRFLSSSSATTATTSSSSSSGMAVKTEMEEDDATAGGIISSSSPELDYFCRAQETIVGLDTVSDWWGQRQAGDGGADVPTPFTAWPALGGGESSSSEGQMRYFVEMATESSPPPPYPFSLLEGGF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2104 315 Gene3D - 4 103 IPR036388 -
Sto8g2104 315 Coils Coil 120 154 - -
Sto8g2104 315 MobiDBLite consensus disorder prediction 193 214 - -
Sto8g2104 315 SUPERFAMILY "Winged helix" DNA-binding domain 10 102 IPR036390 -
Sto8g2104 315 ProSitePatterns HSF-type DNA-binding domain signature. 52 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g2104 315 SMART hsfneu3 9 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g2104 315 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 11 309 IPR027725 -
Sto8g2104 315 MobiDBLite consensus disorder prediction 193 229 - -
Sto8g2104 315 Pfam HSF-type DNA-binding 13 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g2104 315 PRINTS Heat shock factor (HSF) domain signature 13 36 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g2104 315 PRINTS Heat shock factor (HSF) domain signature 51 63 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g2104 315 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g2104 315 PANTHER HEAT STRESS TRANSCRIPTION FACTOR C-1 11 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2104 Sto-Chr8 13763569 13764595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2104 7 277 HSF AT4G17750 36.508 8.05e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Sto8g2104 HSF_DNA-bind 6.9e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2104 K09419 - cit:102615136 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2104 8 13763569 13764595 Sto8g2104 8 13763569 13764595 ECH