Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2097 ATGGAGTTCGACCCAAACTTTGTCAAGAGTTTTCCTACACTTTCTGGGCTTTTCCCAGAAAATCCCCCCAAGTCCTCCCCAGAGTTTTCAATGCCAATGCCAGCTAATTCCCCCATGGACAACTTGCTCCATAGCAACCATGATAGTTTTCAACATTTCCAACAGAATAATCCCCAGATCATGCACCTCATGAACTCCTCAAACTCCAATATAGTTCCTTCTCCTTCTTTGGGTCTTCCTCTCAGTCTCagggataataataataataatgcttaTGCAAATGGGTCCCTGAGAGATTTCATCAACACTACCCGTCACTATAGGAGGGGGATTTGGGATCTTCCACAAAATGTTCCCAACAATCTCATGAATGTATCCTATTCACCATATTATCGTCAACCTCATGGGTTACTACTCAAGGTGCAGGAGCAGGACACTAATAGTGATCAAAGAGGCAATGATGAtgagaacaaaaagaaaaggatgaggaaggagaacgatggttcaGGGGAGAAGGATATCGTCAAAGGCCAGTGGACACCAGAAGAAGACAGGATGTTGATGCAATTGGTGGATCAATTAGGAGTGAAAAAGTGGTCGCAAGTTGCTCAAGCTCTCGGTGGGAGAATGGGAAAGCAATGTAGAGAGAGATGGCATAACCATTTGCGCCCGGACATTAGGAAGGATGCATGGACTGAGGAAGAAGACATGATCCTGATCCAAGCCCACAAGGAACTAGGGAACAAGTGGGCCGAAATTGCTCGGCGACTCCCCGGCCGCACGGAGAACACGGTGAAGAACCACTGGAACGCCACCAAGCGCCGCCAGCACGCCAAGAAGCTGCGCAACAACAAGCCCTCCTCCTCGCGCCCTTCCCTACTTCAGGACTACATCATGCAAGTCATCGACTCCGATGCTCCACCGCCACCACCGGCAGcagcgccgccgccgccgccgccgccaccagAAGTTGATGACTATCATGTCATTCAGGCATTCGACAACATTAATAATAACATCCATGTGAATGCGGGAAATAATTTCGGAGAATGGGAGGTGGAGGTGTATACTCCTGCTGAGGAGGGTGATGATCAGGAAGTTGGAGCCAACAAGAAAGAAATTGATCTCATTGAGATGATGCATGCCAACAAATTTTATAACTAG 1164 0.4373 MEFDPNFVKSFPTLSGLFPENPPKSSPEFSMPMPANSPMDNLLHSNHDSFQHFQQNNPQIMHLMNSSNSNIVPSPSLGLPLSLRDNNNNNAYANGSLRDFINTTRHYRRGIWDLPQNVPNNLMNVSYSPYYRQPHGLLLKVQEQDTNSDQRGNDDENKKKRMRKENDGSGEKDIVKGQWTPEEDRMLMQLVDQLGVKKWSQVAQALGGRMGKQCRERWHNHLRPDIRKDAWTEEEDMILIQAHKELGNKWAEIARRLPGRTENTVKNHWNATKRRQHAKKLRNNKPSSSRPSLLQDYIMQVIDSDAPPPPPAAAPPPPPPPPEVDDYHVIQAFDNINNNIHVNAGNNFGEWEVEVYTPAEEGDDQEVGANKKEIDLIEMMHANKFYN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2097 387 MobiDBLite consensus disorder prediction 141 177 - -
Sto8g2097 387 ProSiteProfiles Myb-like domain profile. 223 273 IPR001005 -
Sto8g2097 387 MobiDBLite consensus disorder prediction 147 177 - -
Sto8g2097 387 CDD SANT 230 273 IPR001005 -
Sto8g2097 387 SMART sant 227 275 IPR001005 -
Sto8g2097 387 SMART sant 175 224 IPR001005 -
Sto8g2097 387 MobiDBLite consensus disorder prediction 271 325 - -
Sto8g2097 387 SUPERFAMILY Homeodomain-like 174 269 IPR009057 -
Sto8g2097 387 CDD SANT 179 222 IPR001005 -
Sto8g2097 387 Gene3D - 175 227 - -
Sto8g2097 387 PANTHER MYB DOMAIN PROTEIN 100-RELATED 77 301 - -
Sto8g2097 387 ProSiteProfiles Myb-like domain profile. 171 222 IPR001005 -
Sto8g2097 387 PANTHER MYB PROTEIN-RELATED 77 301 - -
Sto8g2097 387 Pfam Myb-like DNA-binding domain 179 236 - -
Sto8g2097 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 227 277 IPR017930 -
Sto8g2097 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 171 226 IPR017930 -
Sto8g2097 387 Gene3D - 229 294 - -
Sto8g2097 387 MobiDBLite consensus disorder prediction 304 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2097 Sto-Chr8 13705822 13708143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2097 174 298 MYB Transcription Factor Family AT4G18770 71.429 5.13e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto8g2097 Myb_DNA-bind_6 5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2097 K09422 - jre:108992800 245.743