Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2082 atGGGAGAAGGTGAGGGGGGTGATTGCCCTCCGAAGAATGTATTATCGGATACTGCTGCTGCAGCGTTGCCGTTGGATGTTCCCGCGAAGAAGCTGGCGAGGCAGCTCGATTTTACGGGTTTTGGTGGCGTGTCGGCGAGTGTGGCTTTGCCAGAACATCTTCAATTGCAATTGCAGACTCAGTCTCTCCCACAGCCACCGCCTCAGGGACTGACACAGCAACCAGTGGTTGTGATGCCGATGCCGCCGCAGGCACCTCATTCTTCAGTGAGGGTTGGGAAACCAGAATCTCCAAAATCAAGAACTAGACCCAACTTTGAAATGAAAGACTCTACTCCAAAGAAACAGAAACAGTGCAATTGTAAACACTCAAAATGCTTAAAGTTATACTGTGAATGTTTTGCATCGGGAATATATTGTGAGGGGTGCAACTGTGTAAATTGTTATAACAACGTTGAAAATGATGCTGCTAGACGAGAAGCCGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCAAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGAGACTGGGGAAGTTTTAATATTAGGAAAGCACAACAAGGGGTGCCACTGTAAAAAATCAGGATGCCTGAAGAAGTACTGTGAATGTTTTCAAGCCAACATTCTTTGCTCTGAAAATTGCAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTCCATGGAGATCAAAATAACAATGTAGCATATATTCAGCAGGCAGCAAATGCTGCCATAACTGGGGCTATTGGATCCTCTGGTTTTTCATCCCCTCCAGTAtccaagaaaagaaaaggtcAGGAGCTCTTCTTTGGGCCACCAGCCAAGGATCCATCCATTGGCAGGCCTGGACAATTTCAGCAGGTAAACCTTGTCAGAGGTCCACCCACCTCATCCTTGTCTTCTGTCCCTGGTGCTCGGGTTGGAACTGCCACATTAGGCCCTTCAAAATTTACATACAGGTCTCTTTTAGCAGACATCATACAACCACAGTACTTGAAGGAGCTTTGCTCAGTTCTGGTGCTAGTGTCAGGACGAGCTGCAAAGACATTATCAGACCAGAAAAGTTTAATGGACAAGCGTATTGAAGATCAGACTGAGACTTCCCTTGCTTCTTCAACTCAAGAGCAATTGCCAAGTCGGAAGGAAACTGATGCTGAGAAAACTGCAGCTGATGATTGTTTGAGTGCAAACCAAACAGATAAAATCAGCCCAGCTGACTCTGGTTCTGATGGTGCTGATGTCACAAAGGGGAGGCCAATGTCTCCTGGAACTCTTGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGACAGCTCCCTCTCCTAATGGTTCAATGGCCCATGCCTGCAACACATCTTCACAGTTCACTTGTGGACAAGGCACGACAGAGTTGCATGCAGAGCAAGAAAGGATTGTATTGACCAAGTTTAGAGATTTTCTAAATAGGGTTATCACAATGGGAGAAATAAATGGCAAAAGTGAATTAGAGACTGAAAAGGACCCAATCAGCGAAGGTGTTGGAAATACAAATACCGAGACAGCACCTCAGCAGGTGTTGGAAATACAAGAACCTAGTAATGGTGTCGCCAAAGTTGTAGTCCTACCCATGACCACAAGTATGAACATGATAACTTCAACAGCTTTAATGCCTAGTAATCTTGTTCCTGAAAATGGTGGAAGTAAGCCAAAGATCAAGAAGGAGATCTGA 1773 0.4478 MGEGEGGDCPPKNVLSDTAAAALPLDVPAKKLARQLDFTGFGGVSASVALPEHLQLQLQTQSLPQPPPQGLTQQPVVVMPMPPQAPHSSVRVGKPESPKSRTRPNFEMKDSTPKKQKQCNCKHSKCLKLYCECFASGIYCEGCNCVNCYNNVENDAARREAVEATLERNPNAFRPKIASSPHGTRDSREETGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNVAYIQQAANAAITGAIGSSGFSSPPVSKKRKGQELFFGPPAKDPSIGRPGQFQQVNLVRGPPTSSLSSVPGARVGTATLGPSKFTYRSLLADIIQPQYLKELCSVLVLVSGRAAKTLSDQKSLMDKRIEDQTETSLASSTQEQLPSRKETDAEKTAADDCLSANQTDKISPADSGSDGADVTKGRPMSPGTLALMCDEQDTMFMTAPSPNGSMAHACNTSSQFTCGQGTTELHAEQERIVLTKFRDFLNRVITMGEINGKSELETEKDPISEGVGNTNTETAPQQVLEIQEPSNGVAKVVVLPMTTSMNMITSTALMPSNLVPENGGSKPKIKKEI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2082 590 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Sto8g2082 590 MobiDBLite consensus disorder prediction 274 304 - -
Sto8g2082 590 MobiDBLite consensus disorder prediction 380 440 - -
Sto8g2082 590 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Sto8g2082 590 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Sto8g2082 590 MobiDBLite consensus disorder prediction 94 113 - -
Sto8g2082 590 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 26 70 - -
Sto8g2082 590 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 84 567 - -
Sto8g2082 590 SMART CXC_2 114 154 IPR033467 -
Sto8g2082 590 SMART CXC_2 199 240 IPR033467 -
Sto8g2082 590 MobiDBLite consensus disorder prediction 62 113 - -
Sto8g2082 590 PANTHER TESMIN/TSO1-RELATED 84 567 IPR028307 -
Sto8g2082 590 PANTHER TESMIN/TSO1-RELATED 26 70 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2082 Sto-Chr8 13598228 13606942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2082 1 543 CPP Transcription Factor Family AT4G29000 55.944 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Sto8g2082 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2082 - - gmx:100777698 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2082 8 13598228 13606942 Sto8g2082 8 13598228 13606942 ECH