Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2079 ATGGATCCTCCATCGAAGAGCTGGAGCATCCATACCCGAGCTGATATCATCGCCAAGTACGAAGTTTTGGAGCGGGTCGGCTCCGGGGCTTACTCCGACGTCTACAGAGCCCGCCGCCTCTCTGATAATCTCATCGTCGCCCTAAAAGAAGTTCACGATTACCAATCTGCGTACCGAGAAATCGAGGCCTTGCAGATCCTTCAGGGATCACCAAACGTCGTCGTCATGCACGACTACTTCTGGCGCGAGGACGAGGACGCCGTGCTCGTTCTCGAGTTTTTGAGAACTGACTTAACGTCGGTCATCAGAGAGGCCAAGAAGGAAGGTAGGGGTCTCAGTGTTGGGGAGATTAAGAGGTGGATGATCCAGATTCTTAATGGAGTCGATGCGTGCCACCGCAATATGATTGTGCATCGCGATTTGAAGCCCGGTAATTTGTTGATTTCGGAAGATGGAATGCTCAAATTGGCTGATTTTGGACAGGCAAGGATTCTTATGGAGCCTGGATATGATGCTATGGATGAGAACCCACAACCTTATGAACAAGATACTTCAAATCACGAAAGTTCCCTTCAAAATCCTGAAGTTTTTCCTCAGACAGACAACTTAAACCAAGAAGGATTCTGTAATCAAGAACAGGGAGCTGTGAGTCGAGAAGAATTCTTTAGAGTTTTAGATGAGCTGAAAACTAAAGCCTCCATAGATGACATGGATAAGGACACAAACTTCCAAGATGGAAACACATCTTGTCTTGCAACATGCACAACAAGTGACATGGAAGATGATCTTCTGAAAGGCTCTTTCACATATGAAGCGGAGGAGGGAGGCGATGAACAAGGTGGTCTTACTTCATGCGTTGGAACACGTTGGTACAGGGCTCCTGAACTTCTTTATGGTTCTGAAGATTATGGGTTAGAGATTGATCTGTGGTCAATGGGATGTATCTTTGCGGAGATTCTAACCCTGGAACCCTTATTTCCTGGGACAGCTGATATAGATCAGCTCAGCAGAATCATTGATGTTTTAGGCAACCTCAATGAGGAAGTTTGGCCAGGTTGTTCTAAACTTTGTGATTATAGAAAAATCACGTTTAGTAAGGTGGAGAATCCTCCTGGTCTTGAAGCCTGCCTACCCAACCGATCCCCTGATGAAGTCAGTCTGGTAAAAGAACTGGTTTGTTATCATCCAGCTAGAAGAGCTAGAGCAATGGAGCTACTCCAAGATAAGTTTTTCAAAGAAGATCCTCTTCCTGTACCTATTTCTGGGCTGCGGGTTCCTTTGACAAGAAATGAACCCGACGATGATGGTTATGATTTCAATGGCGTGGATTTTGATTCTGATATGGAGGACTTCAGCCCTTTGAATATCACCAGAACTAGTACTGGTGCTTCTAGCAGAAGATAG 1404 0.4558 MDPPSKSWSIHTRADIIAKYEVLERVGSGAYSDVYRARRLSDNLIVALKEVHDYQSAYREIEALQILQGSPNVVVMHDYFWREDEDAVLVLEFLRTDLTSVIREAKKEGRGLSVGEIKRWMIQILNGVDACHRNMIVHRDLKPGNLLISEDGMLKLADFGQARILMEPGYDAMDENPQPYEQDTSNHESSLQNPEVFPQTDNLNQEGFCNQEQGAVSREEFFRVLDELKTKASIDDMDKDTNFQDGNTSCLATCTTSDMEDDLLKGSFTYEAEEGGDEQGGLTSCVGTRWYRAPELLYGSEDYGLEIDLWSMGCIFAEILTLEPLFPGTADIDQLSRIIDVLGNLNEEVWPGCSKLCDYRKITFSKVENPPGLEACLPNRSPDEVSLVKELVCYHPARRARAMELLQDKFFKEDPLPVPISGLRVPLTRNEPDDDGYDFNGVDFDSDMEDFSPLNITRTSTGASSRR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2079 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Sto8g2079 467 Gene3D Transferase(Phosphotransferase) domain 1 250 416 - -
Sto8g2079 467 SMART serkin_6 20 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2079 467 MobiDBLite consensus disorder prediction 173 205 - -
Sto8g2079 467 SUPERFAMILY Protein kinase-like (PK-like) 6 430 IPR011009 -
Sto8g2079 467 Gene3D Transferase(Phosphotransferase) domain 1 11 206 - -
Sto8g2079 467 PANTHER CYCLIN-DEPENDENT KINASE 10 13 420 - -
Sto8g2079 467 MobiDBLite consensus disorder prediction 178 205 - -
Sto8g2079 467 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Sto8g2079 467 PANTHER CELL DIVISION PROTEIN KINASE 13 420 - -
Sto8g2079 467 ProSiteProfiles Protein kinase domain profile. 20 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2079 467 Pfam Protein kinase domain 279 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2079 467 Pfam Protein kinase domain 20 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2079 Sto-Chr8 13583440 13586054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2079 4 462 Core Cell Cycle Gene Families AT4G28980 63.617 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Sto8g2079 Pkinase 6.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2079 - - mtr:MTR_8g103240 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2079 8 13583440 13586054 Sto8g2079 8 13583440 13586054 ECH