Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2075 ATGAATAGAATTAGTGATGATAATCTCCATGAGAGCTCAGCGGTGCAGCAAATGATGATAATGGCCTCAAACCCTAACTGCTGGAACCTCTTCAACACCAACCCCACGcgcccttcttcttcttcttcttctcctaatTTCTTCTATCCCAACTATaactttctcccttcttcttcttcttcatcttcatcttcttcttcttcttcctcctcctcttcttggcTCCATGACCACCTCCCTCCACCAGACTCATGGACCCAACTTCTCatGAGTGGAGGATGTGGATCGGTGGGCGAGGAAGATGATAATGAAGAGCAAGTACTAGTGTTGAGTGCCCAAGCTgttgataataataatactaacatTATTAAGCAAGAAAGCTCAGTAAATAGCTATGGTTacgctaataataataattataattatattagtagTAGCCACCACCAATTTCATCAACCTTGTTCTGCTTCTTCCCCCAAATCCTCCTGCCTCACCAGTACCAACAACATCTTGGATTTCTCCAATCATCTTCATGCTTCTACTACGCAACAACCTCTTCCAGATCCCTCGCCTCCTcagGTTAGGAAGGAGAAGTTAGGTGACAGAATCACTGCTCTTCATCAGCTTGTTTCTCCATTTGGGAAGACTGACACAGCGTCAGTGTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATCGAGGCCCTTAGCTTACCATACTTGGCCACTGCCTCACCAAACATGAGCCACCAACAACACCAACTTCAACAATCCCTGCTGAATGAAAACTGTTTGAAGAGGAAAGCAGCGGGCAATAAGCTGCAGGAATATTCAatagaagaaggaaagaagaaggatCTGAGAAGTAGAGGATTGTGTCTGGTTCCAGTATCATGCACAATACAAGTTGGAAGTGAGAATGGAGCTGACTATTGGGCTCCAGCTCTCGGTGGGGGCTTTCGCTAG 975 0.3785 MNRISDDNLHESSAVQQMMIMASNPNCWNLFNTNPTRPSSSSSSPNFFYPNYNFLPSSSSSSSSSSSSSSSSSWLHDHLPPPDSWTQLLMSGGCGSVGEEDDNEEQVLVLSAQAVDNNNTNIIKQESSVNSYGYANNNNYNYISSSHHQFHQPCSASSPKSSCLTSTNNILDFSNHLHASTTQQPLPDPSPPQVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLATASPNMSHQQHQLQQSLLNENCLKRKAAGNKLQEYSIEEGKKKDLRSRGLCLVPVSCTIQVGSENGADYWAPALGGGFR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2075 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Sto8g2075 324 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 23 190 - -
Sto8g2075 324 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 194 310 - -
Sto8g2075 324 Gene3D - 193 271 IPR036638 GO:0046983
Sto8g2075 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 246 IPR036638 GO:0046983
Sto8g2075 324 CDD bHLH_AtbHLH_like 193 240 IPR045239 -
Sto8g2075 324 PANTHER OS05G0228400 PROTEIN 194 310 - -
Sto8g2075 324 PANTHER OS05G0228400 PROTEIN 23 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2075 Sto-Chr8 13547441 13551738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2075 189 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 48.529 5.84e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2075 - - zju:107431890 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2075 8 13547441 13551738 Sto8g2075 8 13547441 13551738 ECH