Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2050 ATGGAGCTTGATGGGAAGCCTAAAGTGGGGATGCAATTTGATAACTTAGAGAGTGCTTGGAAATTTTGGAAGAGCTATGGTGGTAAAATGGGATTTGGGGTTAGGAAGGATTTTTCCAACAAGAGCAAAAAGGATGGTGCAATAACTTCTTGTCGATTTGTATGTTCTAAAGAAGGGATAAGAAGAAAACATAAGAGGGATTATTTAACCGTTAATCCTAGACAGGAGACGAGAACTGATTGCAAAGCAAGAATTGTGCTTCGTCATTTGAATGAGAAATTGAAAGTGAAAGAATTTGTAGAGGAGCACAATCACGTACTCCATCTCCCAGAAACTACACACATGTTGGCGTCTCAGCGGCACATTTCTGATGTCCAAGCACATCAACTTGAGTTGGCTGATGAATCTGGAATTCAACAAAGAGCCACTTATGCATTGATGAGCAAGCATGTTGGGGGACGAACGAATCTTGGATATACACGTTTGGATATGAAGAACTATCTTCGCACCCGACGGCAAAAAAATATGAAGTATGGGGAAGTTGGTTGTTTAATGGGTTATTTCCAAGATCAGAACTCGGCAAATCCATTGTTCTTTCATAAATTTCAAATGGATTCAGATGAGCaaataacaaacatattttGGGCCGATGTAAGAATGCAACTAGACTATGCTTATTTTGGTGATGTTGTCTCTCTCGATACAACATACTGCACAAACAATGCACATAGGCGGCTTGCCttgttttcaggatttaatcATCACAGAGGAGTTGTTATTTTTGGGGCTGCATTGTTATATGACGAGACGGCAGCATCATTCAAGTGGTTATTTGAGATGTTCTTGAAGGTACATAATCAGAAAAAACCTCAAACCATCTTCACTGATCAAGACCGAGCAATGGCTAAAGCCCTACAAGAGCATGGGTCTCATTTCTTACGAGACTTCAAGGCTTGTATGTATGAGTATGAGGAAGAGAAAGAGTTCGAAGAGGCTTGGAATGTTAAAAGGTGCTTGAATCCAGATGTTGATATTATTCAATTCTTTAAACACTTTGAACGAGTGGTTGAGGACAAAAGATATAATGAATGGAAGTGTGAATTTGAGGCAAGAGAAAAGTTGCCAAGATTGAGATGTCCAAGTTCGCCCATGCTCCAGCAACTTGCAGAAGTCTACACTCCTATCATTCTTGATATGTTCCAAGATCAATTTGACTTGTTTTCGGCTTGTTGTATAAAGCAAAGAAGGCAAAGTGAGTCATTAATTGAATATGTCATTGATATGTATAAGCATAAGGGAGAGTGGGAAGTCTTGTTTCATACTCAAGAGAAATCAGTTTCTTGCACTTGTAGGAGGTTTGAGATCTTTGGTATATTGTGTTGCCATGCTTTGAAAGTGTTTGAGGCCAACGATGTCAAGTTAGTTCCTGATCAATACATTTTGAAAAGGTGGACAAAGATGGCCAGAACTGGTATTATATTTGATGTCAATGGGAATGAGGTTGAGGAGGACCCAAAATTTAGTCATACGCTTGAAATTAGATCTCTTTGCCAACGTTTTGTCAAGCTAGCTTCCGAAGTCACGGGTAAAGATGAAGTCTTGATACTTCGTTCAGCTACGGAGGAAGTGATCAAGAAAGTTGAGGCACTTCGTTTGGGGAAAATACATGGGACAAATGAGAGTGATGATCCTATAATACCTAGTAGCAATGACATGTCAATACCAACCGGCATCAAGAAGAGGGTTGGAATTAAAAGAAGGAGTCGTCCAAAGAGTAGGGTTGAGCTTCAACTTCGAAATAGAAAAGCTTCAAGGTCTAGATCACATCCAACATTCACACATTCTCAAAGTGAATCCACAGATATTGGAGCTTCAAGTCTAGTGCAATTGGAGAATTCATTTAGTTTTACGAGATTGTTAATGGACCAAAGTGAAGGATCGGTCTCTCTTGGAGCATTAGAGTTTGGTGGTGACAAGCTATGA 1983 0.3918 MELDGKPKVGMQFDNLESAWKFWKSYGGKMGFGVRKDFSNKSKKDGAITSCRFVCSKEGIRRKHKRDYLTVNPRQETRTDCKARIVLRHLNEKLKVKEFVEEHNHVLHLPETTHMLASQRHISDVQAHQLELADESGIQQRATYALMSKHVGGRTNLGYTRLDMKNYLRTRRQKNMKYGEVGCLMGYFQDQNSANPLFFHKFQMDSDEQITNIFWADVRMQLDYAYFGDVVSLDTTYCTNNAHRRLALFSGFNHHRGVVIFGAALLYDETAASFKWLFEMFLKVHNQKKPQTIFTDQDRAMAKALQEHGSHFLRDFKACMYEYEEEKEFEEAWNVKRCLNPDVDIIQFFKHFERVVEDKRYNEWKCEFEAREKLPRLRCPSSPMLQQLAEVYTPIILDMFQDQFDLFSACCIKQRRQSESLIEYVIDMYKHKGEWEVLFHTQEKSVSCTCRRFEIFGILCCHALKVFEANDVKLVPDQYILKRWTKMARTGIIFDVNGNEVEEDPKFSHTLEIRSLCQRFVKLASEVTGKDEVLILRSATEEVIKKVEALRLGKIHGTNESDDPIIPSSNDMSIPTGIKKRVGIKRRSRPKSRVELQLRNRKASRSRSHPTFTHSQSESTDIGASSLVQLENSFSFTRLLMDQSEGSVSLGALEFGGDKL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2050 660 SMART 26again6 446 473 IPR006564 GO:0008270
Sto8g2050 660 MobiDBLite consensus disorder prediction 582 623 - -
Sto8g2050 660 Pfam MULE transposase domain 230 311 IPR018289 -
Sto8g2050 660 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
Sto8g2050 660 Pfam SWIM zinc finger 441 469 IPR007527 GO:0008270
Sto8g2050 660 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 306 IPR031052 GO:0006355
Sto8g2050 660 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 335 552 IPR031052 GO:0006355
Sto8g2050 660 PANTHER OS03G0181600 PROTEIN 335 552 - -
Sto8g2050 660 PANTHER OS03G0181600 PROTEIN 7 306 - -
Sto8g2050 660 MobiDBLite consensus disorder prediction 609 623 - -
Sto8g2050 660 ProSiteProfiles Zinc finger SWIM-type profile. 435 471 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2050 Sto-Chr8 13329663 13332028 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto8g2050 MULE 1.2e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2050 - - ahf:112709060 620.928