Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2047 ATGGCCTCCACCAGGGACAAGTGCGTCGGAAGGAGCAACAAGGGAGTCAGTTGGGGATTTACGTCCGTGATTGGCAGGAGGAAAGAGATGGAGGACGCGATTGCTATTATTCCAGGGTTTATGTCCCTCACCTGCGATCGCGTCGGCGGATGTACGGCTCCGTCATCCAAATCCTCCGCCGAGATCTCGCCCGTTCATTTCTTCGGCGTGTACGACGGCCATGGTGGATCTCAGGTGGCCAAGTTTTGTGCCAAGCGGATGCATAAAGCTATAGCAGAAGAGTGGGATCGAGAAATGGATGAGGGCACTGAATGGCAGGGAAGGTGGGAAGCCGTTTTTGCTAGTGGCTTTGAGAAGACTGACAACGAAATAGTAACAGATGCAGTCGCATCAGAAATGGTAGGATCTACAGCTGCTGTGGTGGTTCTATCTCGTTGCCAAATCATTACATCTAACTGTGGTGACTCAAGGGCAGTTCTATGCCGTGGAACACAAACAATCCCCCTAACAGTGGATCAGAAGCCTGATAGACAAGATGAACTATCGAGAattgaaggaggaggaggaaaagtCATAAACTGGAATGGAGCTAGGGTGTTGGGAGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGCGGCCGTGGATTATTCCGGTGCCGGAGACAACTTTCACGACGAGAAGTGACGAAGATGAGTGCTTAATTTTGGCAAGTGATGGGCTCTGGGATGTCATGAGCAATGCAGAGGTGGGAGAAGTTGCACGCCATATTCTAAGAAGGCGCAGGAGGTCATTGTCCATGGATGAAACTCCAGCTGCACAAGTTGTAGCTGATAGCCTCACTGAGATTGCATGTGGTAGGAATAGTAAAGACAACATTTCAATCATAGTTATTGACCTGAAATCAAAGAGAAAGCGTCAGCAAAGGCCTCCTTTGAATTCCTAA 951 0.4837 MASTRDKCVGRSNKGVSWGFTSVIGRRKEMEDAIAIIPGFMSLTCDRVGGCTAPSSKSSAEISPVHFFGVYDGHGGSQVAKFCAKRMHKAIAEEWDREMDEGTEWQGRWEAVFASGFEKTDNEIVTDAVASEMVGSTAAVVVLSRCQIITSNCGDSRAVLCRGTQTIPLTVDQKPDRQDELSRIEGGGGKVINWNGARVLGVLAMSRAIGDRYLRPWIIPVPETTFTTRSDEDECLILASDGLWDVMSNAEVGEVARHILRRRRRSLSMDETPAAQVVADSLTEIACGRNSKDNISIIVIDLKSKRKRQQRPPLNS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2047 316 Gene3D - 4 312 IPR036457 -
Sto8g2047 316 SMART PP2C_4 7 300 IPR001932 -
Sto8g2047 316 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 3 311 - -
Sto8g2047 316 ProSiteProfiles PPM-type phosphatase domain profile. 17 302 IPR001932 -
Sto8g2047 316 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Sto8g2047 316 SUPERFAMILY PP2C-like 11 303 IPR036457 -
Sto8g2047 316 CDD PP2Cc 19 302 IPR001932 -
Sto8g2047 316 PANTHER ALPHABET, ISOFORM E-RELATED 3 311 - -
Sto8g2047 316 SMART PP2C_SIG_2 46 302 IPR001932 -
Sto8g2047 316 Pfam Protein phosphatase 2C 20 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2047 Sto-Chr8 13283665 13288571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2047 18 312 PP2C-type Phosphatase Gene Family AT4G26080 50.160 4.43e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2047 K14497 - gmx:100793293 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2047 8 13283665 13288571 Sto8g2047 8 13283665 13288571 ECH