Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2045 ATGGATTCCTCAAAGAAGGAAGATCATGATGagcaagagaagaagagaggtaggaataggaataggaataggaatagcAAAGCCATAATTTTCAGATATGCTGATTGGATGGATGTGGTGCTGATGGTAATGGGAGCTTTGGGAGCAATTGGAGATGGAATGTCCACAAACGTATTGCTCATATTCGTCAGCCGTATTATGAACAGTTTGGGTTTCGGGAATAACCACAAACAACATGGTACTGCCAATTTCATGTCTGAGGTTGAAAAGTGCAGTTTGTATTTTGTTTACTTGGGATTAGCAGCCATGGTGGTGGCCTTCATGGAAGGGTATTGCTGGAGCAAAACAAGCGAGAGGCAGGTTCTGAGAATTCGATACAAGTATTTGGAAGCAGTGCTGAGACAAGAAGTGGGGTTGTTGGATTCCCAAGAAGCAACAACTACTTCAGAAATCATAAACAGCATATCAAAGGACACTTCTTTGATCCAAGAAGTTCTAAGTGAAAAGGTACCCCTATTCTTTATGCATTCCTCATCATTCATCTCAGGGATCGCATTCTCTGTGTACTTCTGTTGGAGGTTGGCTATAGTAGCATTTCCAACACTGCTTGTGCTCATCATTCCTGGAATGCTTTATGGAAAGTACTTGCTGATTCTGTCAAAGAAGGCTTATAAGGAGTATGGCAGAGCAAACTCCATTGTAGAACAGGCTCTGAGCTCTATCAGAACTATATATTCCTTCACTGCGGAGAAGAGGATCATGGAAAAGTATTCAGCAATACTGGACATAACCTCAAGCCTAGGAATCAAGCAAGGCATAGCCAAGGGTTTGGCTGTGGGAAGTATGGGTCTGTCTTTTGCAATATGGGCTTTTCTGGCTTGGTATGGAAGCCATTTGGTTATGTACAAAGCTGAAAGTGGAGGAAGGATCTATGCAGCTAGTGTTACCTTCATAATGAGTGGATTATCCCTTGGGGTGGCACTTCCTGAACTAAAGTACTTCACAGAAGCATCTATTGCTGCTTCACGCATATTTGAGATGATTGATAGAATACCATCCATTGATGGTGAAGACACAAAAGGACTTGTGCTAAAGAGCATAAGTGGGAAGCTAGAATTTGAGAGTGTCAAATTCACATACCCTTCTCGTCCAGAAACAGTTGTACTGAAGGATTTTAATCTCAAAGTTGAAGCAGGGAAAACTGTTGCACTGGTTGGTGCAAGTGGGAGTGGTAAATCCACTGCAATAGCATTATTGCAGAGATTCTATGATGCAGATGAAGGTGTTGTAAGGATCGATGGTGAAGACATAAGAAGCCTTCAATTGAAATGGATAAGAGGGAAAATGGGGCTTGTGAGTCAAGACCATGCACTGTTTGGGACAACTATTAAGGAGAATATCATGTTTGGGAAGCCTGATGCTACAATGGATGAAGTAGTTGCTGCAGCCAGTGCTGCCAATGCTCATAACTTCATAAGTCAGCTTCCCGAAGGTTATGAGACCAAGATTGGAGAAAGAGGGGCACTTCTATCAGGTGGACAAAAGCAGAGAATAGCCATTGCAAGAGCCATTATAAAGAACCCTGTAATTCTTCTACTTGATGAAGCAACTAGTGCTCTTGACTCTGAATCAGAATCATTGGTTCAGAATGCCCTTGATCAAGCCTCCATGGGAAGGACCACATTGGTGGTTGCCCACAAGCTATCAACTGTACGAAATGCAGACCTCATAGCAGTCGTCAATGGCGGATGCGTCATTGAAACAGGAACCCATGATGAACTCATCCACCGCCCAAATGGGTACTATGCAAAACTAGCAAAATTACAGAGACAATTCAGTTGTGATATTGACCAAGAACAAAATCCAGAACTGGGTTTTTCTTCAGTGGCAAGAAGCAGTGCTGGTAGACCAAGCACTGCCAAGTCAAGTCCTTCCATCTTCCTAAAGTCACCATTCcctgatgatgataatgatgatgctcCTTCTGATATTGTGTCTCACCCTCCACCTTCGTTCCTTCGTCTTCTTTCTCTGAACGCTTCTGAGTGGAAACAGGGTCTGATTGGAAGCCTCTCAGCTATGGCCTTTGGCTCAATCCAACCCATCTATGCCCTCACCATTGGGGGTGTGATTTCTACCTTTTTTGTTGAAAGCCACGAGGAAATGCGTCGTAGGATCAGAAGCTATTGCTTGATTTTCTCTTTCCTCTCCCTCGCCTCCATCATCCTCAATCTCATTCAACACTACAATTTTGCTTACATGGGAGAGAAGTTAACCAAAAGGGTTAGATTGCGCATGTTGGAGAAGATCTTAACCTTCGAAACGGCTTGGTTCGACGAGGAACAGAACTCCAGTGGAGCCTTATGCTCGAGGTTGAGCAATGAAGCTTCCATGGTGAAATCACTCGTAGCAGACAGAGTTTCCCTATTGGTTCAAACCACTTCTGCTGTAACAATCGCGATGATCATAGGGCTCGTGGTGGCGTGGAAGCTCGCTGTTGTTATGATCGCAGTACAGCCCCTTACGATCCTCTGCTTCTACACACGAAAGGTATTACTATCAACACTCTCAACCAAATTCATCAAGGCTCAAAACCAGAGCACACAAATCGCAGTGGAAGCAGTGTACAATCACAGAATCGTAACATCATTCGGAAGCACGAGAATAGTTCTGAAGCTATTCGACGAAGCTCAGGAGGCGCCGAGGAAGGAAGCGCGGAAGAAATCGTGGCTCGCCGGGATAGGAATGGGCTCAGCCCAGTGCCTGACGTTCATGTCATGGGCTTTGGACTTCTGGTTCGGAGGTAGGTTAGTGGAGAAGGGAGAGATATCAGCAGGCGATGTGTTCAGGACATTCTTCGTGTTGGTGAGCACCGGAAAGGTCATCGCCGACGCGGGAAGTATGACATCCGACCTGGCCAAAAGCTCAACCGCAGTCGCATCCGTCTTCCAAATCCTCGATCGCCAATCACAAATTCCCAAGGGTGGAGATGGGCGTAAGTTGGAGAAGATGAGTGGGAAGATAGAGATGAAGAAGGTTGATTTTGCGTATGCAAGCAGGGGAGAGATGCCAATACTGCGTGAGTTTTGGTTGGAGGTGGAGGGAGGGAGGAGCATTGGACTAGTTGGGAAGAGTGGGTGTGGGAAATCAACGATAATAGCTTTGATTCAGAGGTTCTATGACGTAGACAGAGGATGCATAAAAGTGGACGATGTGGACATAAGGGAATTAGATGGTGAGTGGTACAGGCAGCAAACTGCACTAGTTAGCCAAGAGCCGGTGATATACTCAGGCACCATACGCGACAACATCTTGTTTGGGAAGGAAGATGCATCAGAGAATGAAGTTGTGGACGCTGCACGAGCTGCAAATGCTCATGAGTTCATCTCATCACTGAAGGATGGATATGAGACAGAATGTGGGGAGAGGGGAGTGCAGTTGTCAGGAGGGCAGAAGCAGAGGATAGCCATTGCAAGAGCCATAATCAGAAACCCAACAATACTACTTTTGGATGAAGCAACGAGTGCTTTGGACGTTCAATCAGAACAGATAGTGCAAGAAGCACTTGATAGGATTATGGTTGGGAGGACTACCATTGTGGTGGCACATAGACTTAACACCATCAAGCACCTTGATTCCATTGCCTATCTTGCAGATGGTAAGGTTCTCGAGAGAGGAACCTATGCACAGCTTAGACACAAGAAAGGTGCCTTCTTTGCCCTTTCCACCCATCAAACTTAg 3741 0.4453 MDSSKKEDHDEQEKKRGRNRNRNRNSKAIIFRYADWMDVVLMVMGALGAIGDGMSTNVLLIFVSRIMNSLGFGNNHKQHGTANFMSEVEKCSLYFVYLGLAAMVVAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGLLDSQEATTTSEIINSISKDTSLIQEVLSEKVPLFFMHSSSFISGIAFSVYFCWRLAIVAFPTLLVLIIPGMLYGKYLLILSKKAYKEYGRANSIVEQALSSIRTIYSFTAEKRIMEKYSAILDITSSLGIKQGIAKGLAVGSMGLSFAIWAFLAWYGSHLVMYKAESGGRIYAASVTFIMSGLSLGVALPELKYFTEASIAASRIFEMIDRIPSIDGEDTKGLVLKSISGKLEFESVKFTYPSRPETVVLKDFNLKVEAGKTVALVGASGSGKSTAIALLQRFYDADEGVVRIDGEDIRSLQLKWIRGKMGLVSQDHALFGTTIKENIMFGKPDATMDEVVAAASAANAHNFISQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESESLVQNALDQASMGRTTLVVAHKLSTVRNADLIAVVNGGCVIETGTHDELIHRPNGYYAKLAKLQRQFSCDIDQEQNPELGFSSVARSSAGRPSTAKSSPSIFLKSPFPDDDNDDAPSDIVSHPPPSFLRLLSLNASEWKQGLIGSLSAMAFGSIQPIYALTIGGVISTFFVESHEEMRRRIRSYCLIFSFLSLASIILNLIQHYNFAYMGEKLTKRVRLRMLEKILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVADRVSLLVQTTSAVTIAMIIGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSTLSTKFIKAQNQSTQIAVEAVYNHRIVTSFGSTRIVLKLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMSWALDFWFGGRLVEKGEISAGDVFRTFFVLVSTGKVIADAGSMTSDLAKSSTAVASVFQILDRQSQIPKGGDGRKLEKMSGKIEMKKVDFAYASRGEMPILREFWLEVEGGRSIGLVGKSGCGKSTIIALIQRFYDVDRGCIKVDDVDIRELDGEWYRQQTALVSQEPVIYSGTIRDNILFGKEDASENEVVDAARAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQIVQEALDRIMVGRTTIVVAHRLNTIKHLDSIAYLADGKVLERGTYAQLRHKKGAFFALSTHQT 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2045 1246 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 371 607 IPR003439 GO:0005524
Sto8g2045 1246 SMART AAA_5 398 599 IPR003593 -
Sto8g2045 1246 SMART AAA_5 1035 1227 IPR003593 -
Sto8g2045 1246 CDD ABC_MTABC3_MDL1_MDL2 372 609 - -
Sto8g2045 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 609 IPR027417 -
Sto8g2045 1246 MobiDBLite consensus disorder prediction 1 18 - -
Sto8g2045 1246 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524
Sto8g2045 1246 MobiDBLite consensus disorder prediction 628 646 - -
Sto8g2045 1246 MobiDBLite consensus disorder prediction 1 21 - -
Sto8g2045 1246 Pfam ABC transporter 1030 1175 IPR003439 GO:0005524
Sto8g2045 1246 Pfam ABC transporter 389 538 IPR003439 GO:0005524
Sto8g2045 1246 Gene3D ABC transporter type 1, transmembrane domain 30 978 IPR036640 GO:0005524|GO:0016021
Sto8g2045 1246 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1010 1244 IPR003439 GO:0005524
Sto8g2045 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1245 IPR027417 -
Sto8g2045 1246 Gene3D - 998 1246 IPR027417 -
Sto8g2045 1246 CDD ABC_6TM_Pgp_ABCB1_D2_like 676 992 - -
Sto8g2045 1246 CDD ABC_6TM_Pgp_ABCB1_D1_like 42 344 - -
Sto8g2045 1246 ProSitePatterns ABC transporters family signature. 510 524 IPR017871 GO:0005524
Sto8g2045 1246 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 23 1245 IPR039421 -
Sto8g2045 1246 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 43 336 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g2045 1246 SUPERFAMILY ABC transporter transmembrane region 30 355 IPR036640 GO:0005524|GO:0016021
Sto8g2045 1246 MobiDBLite consensus disorder prediction 628 648 - -
Sto8g2045 1246 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 23 1245 - -
Sto8g2045 1246 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 687 974 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g2045 1246 Gene3D - 361 610 IPR027417 -
Sto8g2045 1246 Pfam ABC transporter transmembrane region 45 317 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g2045 1246 Pfam ABC transporter transmembrane region 689 957 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g2045 1246 SUPERFAMILY ABC transporter transmembrane region 674 987 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2045 Sto-Chr8 13270182 13276891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2045 43 610 Calmodulin-binding Proteins AT2G36910 35.826 2.23e-100 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2045 K05658 - gmx:100819207 1964.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2045 8 13270182 13276891 Sto8g2045 8 13270182 13276891 ECH