Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2035 ATGGGAAGAGCCACTCGGTGGTTGAAGAGCTTGTTCGGCATAAAGAAACACACAGAGCACCTCAAAGAAAACCCAAATTCCTCTTCTTTTCCTCATCCCCACACAGATCCCACAGGTTTATGCCACAATCCATCCACCATTCCCCCCAACATTTCCCCCGCTGAAGCCGCTTGGCTTCAATCTTTCTACACACAAACAGAGAAGCAGCAGAACAAGCACGCCATCGCCGTCGCCGCAGCCACCGCCGCCGCAGCCGATGCCGCCGTGGCTGCCGCCCAGGCCGCCGTCGCCGTCGTCAGACTCACCAGCCACGGCAGAGGCACCATGTTCGGCGGACACGACAGGTGGGCTGCCGTCAAGATTCAAACCGTATTCAGAGGTTACTTGGCAAGGAAGGCATTGAAGGCGTTGAAAGGATTGGTGAAGCTACAAGCACTTGTGAGAGGGTATTTAGTGAGGAAGCAAGCTACGGCGACTTTTCATAGTATGCAAGCTCTTATTAGAGCTCAAGCCACCGTGAGATCCCAGAAAGCTCGTAGTAGGCTAATGAACAGAGACTATAACGAAGGGTATAGATTTGAAGCCCGAGCAAGAAGATCCATGgagAGATTTGATGACACAAGGAGTGAGTTCGCAGCTCCCATTATTCACAGCAGAAGAATGTCGTCTTCCTTTGACGCAACAATGAATAACACAAATAGTGTGGATGGGAGTCCCAAGATAGTGGAAGTGGACACCGGGAGGCCGAAATCGAGGTCGCGAAGGACCAACGCTTCATCAATTTCGGATTTTGGCGACGACCCACAATTCTACGCGGTGTCTTCTCCTCTGCCGATGCCGTCATCGTCGTGTTGTCGGACCCCTGCTCGACTGTCCATACCGGACTATCGCCGGAGCCTGCAGGATTCCGATTGGGGGTTGTTGCCGGCGGCGGCGGGGGAGGAATGCAGGCCGTCGACGGCGCAGAGCACTCCGCGGTTCGCGAATTCTTGCGTGTCGGCGGCGGCGTCGTGCAGGAGCGTGTGCGGCGGCGGCGATGGGTTTTTCCGGCGATACGGGAATTTCCCGAATTACATGGCGGATACGCAGTCTTTCAAGGCGAAATTGAGGTCGCAGAGCGCTCCGAAGCAGCGGCCGGAGCCGGGGGCGGCGAGGAAGAGGGTTTCGCTGAACGAATTGTTGGAGTCGAGGAGTAGTTTGAGTGGGGTTCGAAtgcagaggtcgtgctcgcaGGTTCAGGAAGCGATTAGCTTCAAGAATGCTGTGATGGGTAAGCTTGAGTTTGGAAGAGAGACGGATCAGAGGGATTACTACTTGCAGAGGAGGTGGTGA 1332 0.5413 MGRATRWLKSLFGIKKHTEHLKENPNSSSFPHPHTDPTGLCHNPSTIPPNISPAEAAWLQSFYTQTEKQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGHDRWAAVKIQTVFRGYLARKALKALKGLVKLQALVRGYLVRKQATATFHSMQALIRAQATVRSQKARSRLMNRDYNEGYRFEARARRSMERFDDTRSEFAAPIIHSRRMSSSFDATMNNTNSVDGSPKIVEVDTGRPKSRSRRTNASSISDFGDDPQFYAVSSPLPMPSSSCCRTPARLSIPDYRRSLQDSDWGLLPAAAGEECRPSTAQSTPRFANSCVSAAASCRSVCGGGDGFFRRYGNFPNYMADTQSFKAKLRSQSAPKQRPEPGAARKRVSLNELLESRSSLSGVRMQRSCSQVQEAISFKNAVMGKLEFGRETDQRDYYLQRRW 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2035 443 Pfam IQ calmodulin-binding motif 115 135 IPR000048 GO:0005515
Sto8g2035 443 Pfam IQ calmodulin-binding motif 141 155 IPR000048 GO:0005515
Sto8g2035 443 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Sto8g2035 443 PANTHER IQ-DOMAIN 5-RELATED 1 427 - -
Sto8g2035 443 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Sto8g2035 443 Gene3D - 63 139 - -
Sto8g2035 443 MobiDBLite consensus disorder prediction 21 47 - -
Sto8g2035 443 MobiDBLite consensus disorder prediction 24 47 - -
Sto8g2035 443 Pfam Protein of unknown function (DUF4005) 320 404 IPR025064 -
Sto8g2035 443 SMART iq_5 136 157 IPR000048 GO:0005515
Sto8g2035 443 SMART iq_5 113 135 IPR000048 GO:0005515
Sto8g2035 443 MobiDBLite consensus disorder prediction 230 261 - -
Sto8g2035 443 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2035 Sto-Chr8 13174273 13175783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2035 1 405 IQD Protein Family AT3G16490 48.694 2.31e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2035 - - jre:108987229 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2035 8 13174273 13175783 Sto8g2035 8 13174273 13175783 ECH