Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2028 ATGTCGTGGCAATCTTACGTAGATGACCATTTGATGTGCGACGTCGGCGACGGCCACACCCTCGCCTCCGCTGCTATCACCGGTCACGATGGCTCAGTATGGGCTCAGAGCGCTAACTTCCCTCAGtTGAAACCTGACGAGGTCAAAGGTATCATGAAGGATTTTGACGAGCCAGGTCACCTTGCTCCTACAGGCTTGCATCTTGCGGGCAACAAATACATGGTAATCCAGGGAGAGCCTGGAGCTGTCATCCGGGGGAAGAAGGGATCTGGAGGTATCACCATAAAGAAAACTGGGCAAGCTCTAGTTTTTGGCATCTATGAGGAACCTGTCACTCCTGGACAATGTAACATGGTTGTGGAAAGGTTGGGAGATTATCTCGTTGATCAGGGCATGTAG 399 0.5138 MSWQSYVDDHLMCDVGDGHTLASAAITGHDGSVWAQSANFPQLKPDEVKGIMKDFDEPGHLAPTGLHLAGNKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGM 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2028 132 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
Sto8g2028 132 PANTHER PROFILIN 1 132 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Plant profilin signature 28 41 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Plant profilin signature 53 67 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Plant profilin signature 72 81 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Plant profilin signature 85 100 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Plant profilin signature 105 118 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Plant profilin signature 118 131 IPR005455 GO:0003779
Sto8g2028 132 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Sto8g2028 132 PANTHER PROFILIN 1 132 - -
Sto8g2028 132 SMART prof_2 1 132 IPR005455 GO:0003779
Sto8g2028 132 CDD PROF 2 132 IPR005455 GO:0003779
Sto8g2028 132 Gene3D Dynein light chain 2a, cytoplasmic 1 132 - -
Sto8g2028 132 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Profilin signature 22 31 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Profilin signature 41 61 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Profilin signature 65 79 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Profilin signature 101 114 IPR005455 GO:0003779
Sto8g2028 132 PRINTS Profilin signature 114 131 IPR005455 GO:0003779
Sto8g2028 132 Pfam Profilin 1 132 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2028 Sto-Chr8 13121145 13122824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2028 1 132 Cytoskeleton Gene Families AT4G29340 82.836 2.55e-80 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2028 K05759 - thj:104814590 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2028 8 13121145 13122824 Sto8g2028 8 13121145 13122824 ECH