Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2025 ATGGAGAAAACCTGGATTCTCGCTTTTGATTTTCTCCTCCTCCTTCATCTCCATTTAACTGCAGCCTTTGGTGTCGGCGGTGGCATTGGCGTCGGAGTCGGCGTCGGCGGTGGCGGAGGAGGGGTGGTTTGGGTCGGTGGTGGAGGCGGAGGGGTTAACTCCAGCCCAGGGCCCTCcggatcttcttcttcttcttcttcttcagacAGAGCTTACACGGCACTCCAGGCATGGAAATCGGTGATCACAGAAGACCCATTGGGGATTCTGGCGAGTTGGAATGGTCCTAATGTGTGTTCTTATAAAGGGGTGTTTTGTGCGAACCCTGAGGATGAAATGGCTGCGTCATCGGGTGGGCCTGTGGTTGCAGGAATAGATCTCAACCATGCCAATCTCAAAGGGAGTTTGGTGAAGGAGCTCTCTTTCCTCACTGATATGTCTCTTCTTCATCTCAACACCAACAGATTTGCAGGCACAATTCCTGATACATTCAGAGACCTCGTGTCTCTCGAAGAGTTAGACCTCAGTAATAATCAACTCTCGGGTCCTTTTCCCATTGTTGCTTTATCAATGCCCAACCTCGTTTACTTGGACCTCAGATTCAACTCCTTCTCTGGAAACCTCCCTCAAGATCTTTTTAACAAGAATCTCGATGCTATATTTCTCAATAACAATCAATTTGATGGTGAAATCCCACAAAATTTGGGGAATTCCCCTGCTTCGGTCATAAATTTGGCTAATAACAGGTTCAGTGGAAGCATTCCTGCAAGTTTCACTTTCATGGGTTCTAAGCTGAAGGAGATTCTGTTCTTGAATAACCAGTTAAGTGGGTGCATTCCTGAAGGGGTGGGGCTGTTCACAGAGATGCAAGTTCTGGATGTGAGCTTCAATTCACTCATGGGTCATTTGCCAGACACCATTTCTTGTCTGCAAGAGATTGAAGTGCTCAATTTGGGGCATAACAAGCTTTCTGGGGAATTACCGGATGTGATCTGCTCTCTGAGAAGCCTAATGAATCTAACTGTTGCCTATAATTTCTTTTCTGGGTTCAGCCAGGAATGCTCGAGGCTGTTCTTTAGGAATGTGGGTTTTGATTTCTCAGGTAACTGCATTCCAGGGAGGAACATGCAGAAACCTCAACCAGATTGTTCTGTGATACCAGGTGGTAGCCTAAACTGTCTCAGAATCCCTACTCCAAAGCCTCTTGTTTTTACCCCTATAGTTACTTACAGGTTGGTCGTGGCAGTTCTGTTAATTAATGCTAGCAATTATGATTCAGACCTTgctaatttaattctttatggTTCCACTATACCTGTTCCGGCGTTGTTGGTCTCCTCGGCGAGTCTCCAGCTGTCGCAGTACAGAGTATCGTCCACCCTAGCCTTCCGATGGACTGAAATGTATCTTTCCGACGGGAGTTTGATCGTTGACTCGGAAGATATGGGATGGATGAGAGCCATCGTTGAAAGGACTACTAACATGGACAACAAACCCGAACCCATTGCCGGAAAACAGAAGTCGGGAACTGCTTTCCGGTTTACCTTTTTTGAACTTCTCAGATCAAAAGAAGTTAGCTGGAGGCGAAACAAAAAGTGA 1599 0.4528 MEKTWILAFDFLLLLHLHLTAAFGVGGGIGVGVGVGGGGGGVVWVGGGGGGVNSSPGPSGSSSSSSSSDRAYTALQAWKSVITEDPLGILASWNGPNVCSYKGVFCANPEDEMAASSGGPVVAGIDLNHANLKGSLVKELSFLTDMSLLHLNTNRFAGTIPDTFRDLVSLEELDLSNNQLSGPFPIVALSMPNLVYLDLRFNSFSGNLPQDLFNKNLDAIFLNNNQFDGEIPQNLGNSPASVINLANNRFSGSIPASFTFMGSKLKEILFLNNQLSGCIPEGVGLFTEMQVLDVSFNSLMGHLPDTISCLQEIEVLNLGHNKLSGELPDVICSLRSLMNLTVAYNFFSGFSQECSRLFFRNVGFDFSGNCIPGRNMQKPQPDCSVIPGGSLNCLRIPTPKPLVFTPIVTYRLVVAVLLINASNYDSDLANLILYGSTIPVPALLVSSASLQLSQYRVSSTLAFRWTEMYLSDGSLIVDSEDMGWMRAIVERTTNMDNKPEPIAGKQKSGTAFRFTFFELLRSKEVSWRRNKK 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2025 532 Gene3D Ribonuclease Inhibitor 68 238 IPR032675 -
Sto8g2025 532 SUPERFAMILY L domain-like 70 371 - -
Sto8g2025 532 Gene3D Ribonuclease Inhibitor 239 359 IPR032675 -
Sto8g2025 532 PANTHER LRR/EXTENSIN 1 402 - -
Sto8g2025 532 Pfam Leucine rich repeat N-terminal domain 72 106 IPR013210 -
Sto8g2025 532 Pfam Leucine rich repeat 148 203 IPR001611 GO:0005515
Sto8g2025 532 PRINTS Leucine-rich repeat signature 170 183 - -
Sto8g2025 532 PRINTS Leucine-rich repeat signature 310 323 - -
Sto8g2025 532 ProSiteProfiles Leucine-rich repeat profile. 169 190 IPR001611 GO:0005515
Sto8g2025 532 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2025 Sto-Chr8 13104036 13107685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2025 70 393 Leucine-rich Repeat extension Gene Families AT3G22800 49.538 6.40e-103 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2025 - - gmx:100775544 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2025 8 13104036 13107685 Sto8g2025 8 13104036 13107685 ECH