Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2023 ATGAAGATTGAGCAATTGGACGATGTGGATTCCAGTCGGGACGAAGGTAATTATGAGAGCCAGATTGTGAGAGTTGACGCAAAGAGAGCGTTAGTTGGAGCAGGTGCTCGAATCCTTTTTTACCCGACTCTTTTGTATAATGTGCTCCGGAACAAGATTGAAGCTGAGTTCAGGTGGTGGGATGAAGTTGACGAGTTTTTATTATTGGGCGCTGTTCCATTTCCGAAAGATGTTCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTGAATGAACCTTATGAAACGTTGGTACCATCATCATTATATCATGCTCATGGGATTGATCATCTAGTGATTCCTACAAGGGATTATCTCTTTGCCCCATCATTTGTGGATATCAGCCGGGCTGTGCAATTCATTCATCAGAATGCATGTTGTAGTAAAACTACTTACGTTCACTGTAAAGCTGGTCGGGGACGGAGTACAACAATCGTTCTTTGTTATTTGGTTGAACACAAGAACATGACACCTGTTGCTGCCTTGGATTATGTGAGGTCTCGAAGACCTAGAGTGCTACTAGCACCATCACAGTGGAAGgactTTAATAAGCAGGCTGTTCAAAAGTATAGCAAGTGTCTATCTACTCCTGTTCCTACTCCTACTTCTACTCCATACTCTCCCTCTGGAGATACAGTAGTTGTAACCAAAGCTGATCTTGAGGGTTACCATAACACTTGCGATAATGGCATGGAGGTGGGCATTGTTACCAAAGTACCAAAGGCTAAGCCCATGATAGCAAAACTATCTTGCCTGTTTGCGTCCCTAAAAGTTTCTGGCAGTAGTATACCAGTAACCAGGCGGCTGCAAGTTTCTGAGGCACGTGCCTGCTAA 879 0.4391 MKIEQLDDVDSSRDEGNYESQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFVDISRAVQFIHQNACCSKTTYVHCKAGRGRSTTIVLCYLVEHKNMTPVAALDYVRSRRPRVLLAPSQWKDFNKQAVQKYSKCLSTPVPTPTSTPYSPSGDTVVVTKADLEGYHNTCDNGMEVGIVTKVPKAKPMIAKLSCLFASLKVSGSSIPVTRRLQVSEARAC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2023 292 PANTHER OS01G0739200 PROTEIN 4 292 - -
Sto8g2023 292 PANTHER - 4 292 - -
Sto8g2023 292 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Sto8g2023 292 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Sto8g2023 292 CDD PTPMT1 59 207 IPR044596 GO:0004721
Sto8g2023 292 Pfam Dual specificity phosphatase, catalytic domain 82 196 IPR000340 GO:0008138|GO:0016311
Sto8g2023 292 Gene3D Protein tyrosine phosphatase superfamily 59 207 IPR029021 -
Sto8g2023 292 SMART dsp_5 62 200 IPR020422 GO:0006470|GO:0008138
Sto8g2023 292 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Sto8g2023 292 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 195 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2023 Sto-Chr8 13088663 13090668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2023 1 280 Protein tyrosine phosphatase (PTP) family AT2G35680 50.765 2.20e-100 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2023 - - gmx:100817410 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2023 8 13088663 13090668 Sto8g2023 8 13088663 13090668 ECH