Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2022 atgagtaATTTGGGAGCGGTGAACAGTTGTGATCTGATAGATGCGAAGCTGGAAGAGCATCAGCTTTGTGGATCCAAGCAGTGCCCTGGTTGCGGACACAAGTTTGAAACCAAGCCGGACTGGGTAGGCCTTCCGGCGGGAGTGAAGTTCGATCCAACAGACCAAGAACTAATCGAACACCTGGAAGccaaagtggaatcgaagcacGTCATGAAATCCCACCCTCTCATAGACGAGTTCATTCCCACCATCGAAGGCGAAGACGGAATTTGTTACACCCATCCCGAGAAACTCCCAGGAGTAACAAGAGACGGATTGAGCAGGCACTTCTTCCACAGGCCGTCCAAGGCCTACACGACGGGCACGAGAAAGAGGAGAAAGATCCAGAACGAGAGCGAGATacaaggaggaggaggagcaagTAGTGGAGGAGAGACGCGATGGCACAAGACAGGGAAGACTCGCGCGGTGATGGTGAACGGGAAGCAGAAAGGATGCAAGAAGATTCTAGTACTCTACACCAACTTCGGCAAGAACCGCAAGCCCGAGAAGACCAACTGGGTGATGCACCAGTACCACTTGGGCCAGCACGAGGAGGAAAAAGAAGGCGAGCTCGTCGTCTCCAAGATCTTCTTCCAGACCCAGCCCAGACAGTGTAATTGGGCCTCCGATCGAACCACCACCCCTCCCTCATCCGAACCTCCACCCACTGCTAGCAGGAGAGACAGCACTGGCAGTGGCAGTTGTTCCTCTTCCGCTCAGACCCAGACCCACACTCAGAATTTGTCTCCTCCGGTTGTTGGGGTCCTCCCTCCGGTTTCCTCCTTCGCTCATGCCTTGGATACTATCCAACACTTGGGCTTCCTCCCTTTCCGAAAAACCACCCCCTTCGATCAGgTGGGAGTGGGAATAGGAGAGGGTTCGCGGGGAAGAGAAGTAGTGCAGGGAGGGGAACAAATTGATGAAGGGCAGAGGCAACATCAGCATCAACATCATCAGAATATGGCAAACGCAGCGTTTCATATAAGTAGGCCTTCACTTCCTATCTCTACCATTATCTCGCCACCTCCTCTCCATCACACCTCCATCATCCTCGACGATAACTCCTACCAAGTCTCTCGAGTTATGCTCCAAAACGAAAATTTCCAgTTTAATGGATGGCAGCAACAGCAGCAGCAACAACATCATAAACTAGGTGGAAGGTCTGCGTCTGGTTTGGAGGAACTCATTATGGGATGCACTTCAACTGATATTAAAGCGGAATCATCCATCACAAATCCGCAAGAAGCTGAATGGTTAAAGTATTCGTACTGGGCTGACCCTGACAACCCGGATCATCATGGGTAA 1347 0.4981 MSNLGAVNSCDLIDAKLEEHQLCGSKQCPGCGHKFETKPDWVGLPAGVKFDPTDQELIEHLEAKVESKHVMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNESEIQGGGGASSGGETRWHKTGKTRAVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFFQTQPRQCNWASDRTTTPPSSEPPPTASRRDSTGSGSCSSSAQTQTHTQNLSPPVVGVLPPVSSFAHALDTIQHLGFLPFRKTTPFDQVGVGIGEGSRGREVVQGGEQIDEGQRQHQHQHHQNMANAAFHISRPSLPISTIISPPPLHHTSIILDDNSYQVSRVMLQNENFQFNGWQQQQQQQHHKLGGRSASGLEELIMGCTSTDIKAESSITNPQEAEWLKYSYWADPDNPDHHG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2022 448 SUPERFAMILY NAC domain 39 213 IPR036093 GO:0003677|GO:0006355
Sto8g2022 448 Pfam No apical meristem (NAM) protein 45 194 IPR003441 GO:0003677|GO:0006355
Sto8g2022 448 MobiDBLite consensus disorder prediction 237 264 - -
Sto8g2022 448 ProSiteProfiles NAC domain profile. 44 213 IPR003441 GO:0003677|GO:0006355
Sto8g2022 448 MobiDBLite consensus disorder prediction 218 266 - -
Sto8g2022 448 Gene3D NAC domain 53 217 IPR036093 GO:0003677|GO:0006355
Sto8g2022 448 MobiDBLite consensus disorder prediction 118 152 - -
Sto8g2022 448 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 3 429 - -
Sto8g2022 448 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 429 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2022 Sto-Chr8 13080466 13083965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2022 10 445 NAC Transcription Factor Family AT5G56620 50.211 4.33e-129 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g2022 NAM 4.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2022 - - gmx:100795246 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2022 8 13080466 13083965 Sto8g2022 8 13080466 13083965 ECH