Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2004 ATGGGCAGGAGGATACTGAATGATGCATTGAGAAGTATGGTGAACGCAGAGAGGAGGGGAAAAGCTTCTGTGGAGTTGAAGCCCATCTCCACTGTCATATCCTCCTTTCTCAAGATCATGAAAGACCGAGGCTATATCAAGGACTTTCAAGTCTATGATCCGCACAGAGTGGGGAGAATAACAGTTCAACTACAGGGCAGGATTAAAGATTGCCGAGCCCTTACATACCGCCAAGATGTCAAGGCAAAGGATATTGAAGACTACAGATTGAAAACTCTTCCAACACATCAGTGGGGTTATGTTGTGGTTACGACCCCTGAAGGTGTTTTGGATCATGAAGAGGCCATTAAACGGAACGTAGGTGGTCAGGTTCTTGGTTACTTTCACTAG 390 0.4564 MGRRILNDALRSMVNAERRGKASVELKPISTVISSFLKIMKDRGYIKDFQVYDPHRVGRITVQLQGRIKDCRALTYRQDVKAKDIEDYRLKTLPTHQWGYVVVTTPEGVLDHEEAIKRNVGGQVLGYFH 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2004 129 Gene3D - 69 129 - -
Sto8g2004 129 PANTHER 40S RIBOSOMAL PROTEIN S15A-5 1 129 - -
Sto8g2004 129 Gene3D - 2 68 - -
Sto8g2004 129 SUPERFAMILY Ribosomal protein S8 3 129 IPR035987 GO:0003735|GO:0005840|GO:0006412
Sto8g2004 129 Pfam Ribosomal protein S8 6 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sto8g2004 129 ProSitePatterns Ribosomal protein S8 signature. 99 116 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sto8g2004 129 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2004 Sto-Chr8 12959642 12960679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2004 1 129 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 82.171 8.87e-81 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2004 K02957 - jre:108989768 243.432