Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2003 ATGGAGGACAAACTAATTCCACCCGCTATCCCCAATCTTCCAATATTGAAGAGTGAGGCATTAGAGAAGTATATACTGGAGACCAACGTGTACCCACGAGAAGCAGAGCCTCTCAAAGAGCTGAGGAATGCCACTGCAAATCATCCTCTGCACTTTATTGGCACTTCACCTGATGCGGGTCAACTATTGGCCTTGATATTAAACCTTCTGAATGCCAAAAAGACTATTGAAATTGGTGTTTATACTGGTTACTCTCTTCTCCTCACTGCACTTACCATTCCTCATGATGGAAAGATTTTAGCTATGGATCCAAACAGAAAAACTTATGAAATAGGACTTCCTTTTATCAAAAAGGCTGGTGTGAAACACAAGATCGACTTCTTAGCATCTCCAGCTCTACCAGTTTTGGATGAACTCTTACAAGATCCCGCAAATGAAGGAAGTTTTGACTTTGCGTTCGTTGATGCTGACAAGAACAATTATTGGAACTACCACGAGAGGCTTATGAAATTGGTGAAGGTTGGTGGGATAATTGCCTACGATAATACACTGTGGGGTGGAACTGTAGCGATGGCTGAGGAGGAAGTCCACGAGTTCAAAAGAGAATTTAGAAAGTGTGCTATTGCCTTCAACAAAGCCATTTCAGAGGATTCTCGTATCCAACTTGCCTTTGCTTCTGTCGGCGATGGCATCAGTTTCTGCAGGCGCATTCTCTGA 717 0.4296 MEDKLIPPAIPNLPILKSEALEKYILETNVYPREAEPLKELRNATANHPLHFIGTSPDAGQLLALILNLLNAKKTIEIGVYTGYSLLLTALTIPHDGKILAMDPNRKTYEIGLPFIKKAGVKHKIDFLASPALPVLDELLQDPANEGSFDFAFVDADKNNYWNYHERLMKLVKVGGIIAYDNTLWGGTVAMAEEEVHEFKREFRKCAIAFNKAISEDSRIQLAFASVGDGISFCRRIL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2003 238 PANTHER O-METHYLTRANSFERASE-RELATED 14 237 - -
Sto8g2003 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Sto8g2003 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Sto8g2003 238 Pfam O-methyltransferase 29 237 IPR002935 GO:0008171
Sto8g2003 238 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 14 237 - -
Sto8g2003 238 Gene3D Vaccinia Virus protein VP39 9 238 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2003 Sto-Chr8 12954412 12955681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2003 15 237 Monolignol Biosynthesis Gene Families AT4G26220 65.022 9.60e-110 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2003 K00588 - gmx:100795229 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2003 8 12954412 12955681 Sto8g2003 8 12954412 12955681 ECH