Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1987 ATGAAGCGTCAAGTAGTAATAGTGAGAAGATCAGAAGAATCTGGAAGCAGAGGGAGAAGCAGAAGTAGTAGCGTGAGATATGGAGAGTGCCAAAAGAATCACGCAGCTAACGCCGGAGGGTACGCCGTGGACGGCTGCCGGGAGTTCATGGCCGGCGGAGATCAAGGCACGGGTGATGCTCTTGCTTGTGCTGCTTTTGTGTTGATTTCTGGGTTTTGTTTTGCTTGCTTCtcgaggaagaagaagcagtTCTCATCAGTTTTATGA 267 0.4607 MKRQVVIVRRSEESGSRGRSRSSSVRYGECQKNHAANAGGYAVDGCREFMAGGDQGTGDALACAAFVLISGFCFACFSRKKKQFSSVL 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1987 88 MobiDBLite consensus disorder prediction 1 19 - -
Sto8g1987 88 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 80 - -
Sto8g1987 88 PANTHER BNAA09G44460D PROTEIN 4 80 - -
Sto8g1987 88 Pfam ZF-HD protein dimerisation region 25 65 IPR006456 -
Sto8g1987 88 MobiDBLite consensus disorder prediction 1 26 - -
Sto8g1987 88 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 27 76 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1987 Sto-Chr8 12875680 12876240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1987 23 65 ZF-HD Transcription Factor Family AT1G74660 81.395 2.07e-19 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Sto8g1987 ZF-HD_dimer 1.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1987 - - han:110879706 86.6557