Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1985 ATGTTGTACTGTATATTTTGCAGATATTATAGTCCTGAAGCAACCAGTAAGGATTGTTCTTCCACTTTTTCCACAGAAAGATACCAAATTGGCACAAATAGTGACAATGTGGGTCTTCAAGAAGAAGAGGAGCCGCCAAAGTTGGTTTTCAAGTTCCAATATCAAAGTTGGAACTATGGAGAAGAATTGAATGCAGGGTATAGTGAAAGTTATGATTTTGAGAGAGACTTGGTTCCAGAAAGTGTAAAGAAAGAGGAAATGGAAGAGAAGGTGAAGGCCAAACCAGAAAATTTTGGTGACCAAGAAAAGAAGCTAATTGATTGTTCAGATGAATTATCTGCAAAACCCAATTTACAGAATTCAACAGTTTTGGATCTTGAGTATTCCATTTCCAAAACACTTCGGAAGCATCTAGATTTAGTACAAGTAAAGCAGGTGAAGAAGGTTAGTCTTAGAGCCACTGGTCTGCCTACCATCCTCGAGGATTCTGAGTCTCCAAGGATAATGGAGGACTTGAAGCCATGGAAGAATAATGAGAAATTCCAACATAGTACCATCATCAATGAGCTTCCAAAATTTTACAGGTGTTACAGAGAACGAATGCGAAAATTCGATATCTTCAATTGCCAAAACATGTTTGCTGTAGGTTTAATGCAGTCAAAGGAACCTCTGAAACCGTTTCCGACGTGCAAGGCCTCAGCTTGTTCAGCAGTGGGATGGCTTATTTCACATAGCTTTGGAATTTGTAAAGGCAATAATAAAGTAGAAGAATTGAGCccagtgaagaagaagaagatgatgatgatgagagaaATGTACAGTGAGATGGAAGTGGTGTATGTGGGACAGTTGTGTCTTTCTTGGGAAGTGCTTCAGTGGGAATACGAGAAGGCATTGAAGATATGGGAATGTGACAACTATGGATTAGCGAGGTACAACGAAGTGGCAGGGGAATTCCAACGGTTTCAAGTGCTGCTCCAAAGATTTATTGAGAATGAACCTTTCCAAGGTCCACGTGTTGAAACCTACCTCAAGCATCGTTGTGTTATGCCGAATCTTCTTCAAGTTCCATTAGTAAGAGTGGAAATATTGGAAGAATCAATCAGAACGATGTGGCGTTTCATTAGAGCCGATAAGCATGCATCTAGCTTCACTCTGGCTCAGCTCCAACACCATGCAGATAATTCAGAGCTTTTATACGAGGTTCGGGCAGATGTTCAAAAGAAGGAGAAGATGGTGAGTGAAGGACTGAGGAGAGGCATATGGAAGAAGTTGGAAAaggatgaggaagaagatgaaaggGATGGTGTGGTTTACTTCTTCGCACAGGGTTTATTCGAGGCTGCATTTAACACTCCTCATTCGCCTTCTAGTTCTAGGCTTTCTGTTCCAGCGAGCAGCCTCAAGATGGTTCAAAGACTTACTTATCGTAAGCGCCACAGCTATGCCACCAAATCTAATCAGCATAGGGTTGTCAAAACCCCTGGTGGGAAGTTAGTGTATCAGACTACCAAGAAGAGGGCAAGCGGACCCAAGTGCCCTGTAACTGGGAAGAGGATCCAAGGGATTCCACACCTGAGGCCCGCAGAATACAAGAGGTCTAGATTGCCTAGGAACCGTCGGACAGTAAACCGGGCCTATGGAGGTGTACTATCTGGAGGAGCTGTGAGAGAAAGGATTATCCGGGCTTTCTTAGTTGAAGAACAAAAGATTGTGAAAAAGGTACTGAAGATCCAGAAGGCAAAGGAAAAGCAAGCATCAAGGAGTTAA 1770 0.4113 MLYCIFCRYYSPEATSKDCSSTFSTERYQIGTNSDNVGLQEEEEPPKLVFKFQYQSWNYGEELNAGYSESYDFERDLVPESVKKEEMEEKVKAKPENFGDQEKKLIDCSDELSAKPNLQNSTVLDLEYSISKTLRKHLDLVQVKQVKKVSLRATGLPTILEDSESPRIMEDLKPWKNNEKFQHSTIINELPKFYRCYRERMRKFDIFNCQNMFAVGLMQSKEPLKPFPTCKASACSAVGWLISHSFGICKGNNKVEELSPVKKKKMMMMREMYSEMEVVYVGQLCLSWEVLQWEYEKALKIWECDNYGLARYNEVAGEFQRFQVLLQRFIENEPFQGPRVETYLKHRCVMPNLLQVPLVRVEILEESIRTMWRFIRADKHASSFTLAQLQHHADNSELLYEVRADVQKKEKMVSEGLRRGIWKKLEKDEEEDERDGVVYFFAQGLFEAAFNTPHSPSSSRLSVPASSLKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASRS 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1985 589 PANTHER OS09G0413600 PROTEIN 89 443 - -
Sto8g1985 589 ProSitePatterns Ribosomal protein L34e signature. 484 497 IPR018065 -
Sto8g1985 589 Gene3D - 508 589 - -
Sto8g1985 589 PRINTS Ribosomal protein L34 signature 482 495 IPR008195 GO:0003735|GO:0005840|GO:0006412
Sto8g1985 589 PRINTS Ribosomal protein L34 signature 495 512 IPR008195 GO:0003735|GO:0005840|GO:0006412
Sto8g1985 589 PRINTS Ribosomal protein L34 signature 513 523 IPR008195 GO:0003735|GO:0005840|GO:0006412
Sto8g1985 589 PRINTS Ribosomal protein L34 signature 535 557 IPR008195 GO:0003735|GO:0005840|GO:0006412
Sto8g1985 589 Pfam Protein of unknown function (DUF1666) 361 441 IPR012870 -
Sto8g1985 589 Pfam Protein of unknown function (DUF1666) 274 360 IPR012870 -
Sto8g1985 589 Gene3D - 470 506 - -
Sto8g1985 589 PANTHER OS09G0413600 PROTEIN 89 443 - -
Sto8g1985 589 Pfam Ribosomal protein L34e 470 565 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1985 Sto-Chr8 12851443 12856726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1985 470 586 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 92.308 1.61e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1985 - - gmx:100785051 351.673