Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1977 ATGGCTGGGCAAACTCACTCCAACAAGATTGAATCATGGTCTGAAAAGATACACCAGAGGCTGGACAATATAGAAGATCTATTGAGACAATATTTTCTCTTAAAGTTTGGTCAAGATTGGGATGAAATGAAGGCGGCAGAGTTGAAATCCAAATCTGATATTGATCTTGATACACAACGGGATAACGCTTCAATGCCAAGGGTAGAAGAGCAAAACCTTTATTTAGATCCTGTGTTCTCGTCGACAACGGCACCGGTGACGTTAACCGTTATTGAAGATGAACAATTGGATGAGGCGAAGATTTCTGCTAAATCGATTCCAATAAGTCCTGTATCAATTTTCCAACCAGAAATATGTGTGAGTGATAATCCtgtaatttctttaaaaacaaataaaaaatgcgAAGAACAACCCGCTGCCGTTTTGGAAGCCAACATTGCTGTTTATGTTGTGGAAGAACTTGCTGAAGATCAAATTGATTTATCCATGGGTTATGATGTCCACGATCTAGCAGCTGCAATTCCAACTGTTAATGGTCTAGTAGCTGTAAATGGGGAgcccaaagagaaaaaaatagttatggatgaaattgatttttcattaaacTCACACAAGGGATTTAAGGATGTGGTTTACGTGCATGACCACTCTGAAATTGCTGTGAAACTACAAAAGGATACAGGGCATTGGGAAATTCCTCTTCAAGTGAATGAGGGAGCTTTGATGGATGAGCATAATAATGAAATCCTTTATCCATTTAAGTTGTTTTATGTTAATAAGAAAGGGAAGAATATGCAAAATTCTACTATGCCTTTACTAAAGAACCAAAAGGAAGGGATATCATTGGCTTTGAGACAGGAAAGTTCTACAGTTATAGAGGGTATTCTAAAAGAAATGGGAGTGGAAAAGAATATTCAACTCATTGCCCTTGTTCTTGCCAAATGTGAACTCCAAGTCATGGTTAATGAATCATATCATGAATCTTCATCTTTTCCAGACTCATCTGCAATCTTTACCATGATTATGGGCACACTCATAATATGCTCTATGGTTGCTGTCATTCAGCGGGTTAGTGAGGCAGCAATTTATGTTTGTGATTCCAACTTTAACTATCCTGAAATTTTAATGGAGATGGGTAAGAGATCTTGCTATGAAGCACCACAATGGTTCATTGTTACACAAATAGGAGAAGCTGGGGAAGATGAGCTTGTCAATAAACTTATCAATCAAGATATTAGAGACTTTGCAGTTGGAAACATAAAGCTTGTTCCAAGCTTATTTGATTTTGACCTTCATCTTGGGGATTCTAAAATAGCAACATTAATTACTGAGATAAAAAATGTCACAGATGCTGCTTCTTTAATGCCACTTTGGGAGGAATTGGAGTGGAGAGACCACATTGAGTATAAATTTGGTGAGCTTGTTGCTACTATCATGGTTTTTAATCTTggaatttgtgaaaattttgcTGCTGATTATGTTGTTGAATCTCTATGTGGTGGTGGTCTTGTATACACTTGGCTTAGCCCAGTATCAACAATTGATGGAGAACTTGGTGTCAGCATGAGTGCTCCTTATGTAAAGAACATTCTAGTtgagattattatttttatttttgatccgGGAGGTGGTAGCAGTTTGGAGTGCAAATGGAATGAGTTTGTTGCcaaccttgaggacaaggttgtTTTGATGGAGGGAATATTGATACAAACCAAGAAGTTGGGTccattaagcccaataatgaaGACTCATTTTTAG 1761 0.347 MAGQTHSNKIESWSEKIHQRLDNIEDLLRQYFLLKFGQDWDEMKAAELKSKSDIDLDTQRDNASMPRVEEQNLYLDPVFSSTTAPVTLTVIEDEQLDEAKISAKSIPISPVSIFQPEICVSDNPVISLKTNKKCEEQPAAVLEANIAVYVVEELAEDQIDLSMGYDVHDLAAAIPTVNGLVAVNGEPKEKKIVMDEIDFSLNSHKGFKDVVYVHDHSEIAVKLQKDTGHWEIPLQVNEGALMDEHNNEILYPFKLFYVNKKGKNMQNSTMPLLKNQKEGISLALRQESSTVIEGILKEMGVEKNIQLIALVLAKCELQVMVNESYHESSSFPDSSAIFTMIMGTLIICSMVAVIQRVSEAAIYVCDSNFNYPEILMEMGKRSCYEAPQWFIVTQIGEAGEDELVNKLINQDIRDFAVGNIKLVPSLFDFDLHLGDSKIATLITEIKNVTDAASLMPLWEELEWRDHIEYKFGELVATIMVFNLGICENFAADYVVESLCGGGLVYTWLSPVSTIDGELGVSMSAPYVKNILVEIIIFIFDPGGGSSLECKWNEFVANLEDKVVLMEGILIQTKKLGPLSPIMKTHF 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1977 586 PANTHER - 270 360 - -
Sto8g1977 586 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 270 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1977 Sto-Chr8 12776876 12779350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1977 270 364 RAD5 or RAD16-like Gene Family AT1G05120 38.542 2.81e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1977 - K15083 sly:101254345 78.5666