Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1974 ATGGCGTTAAACGGTGAAGGCGATATTGTGGGAACATCGAAGGCAAACAAGAAAAAGGATCGTCCTTCTGGGTGTTGGATGAAATTGAGCTTCATCGGAAGCTGCGGTTTCCTTAAGAGCAAACTGAGCACCTCTGGAAAAAACAAGAGCATCGTTTCTGGAAACGCATCTTCCTCCCGCAACATAAATGATGGGGTGGAAATGCAATTCTCTTCCAATCTCCGAAGGTTCTCGTTCAGTGAGCTCAAGAGTGTCACAAGAAATTTCAAGGCTGACAGTATAATTGGGGAGGGAGGTTTCGGTATTGTTTTCAAAGGCTGGCTCAGTCAAGTAAGGTCGTCATCTAGCTCCGGGATGATCCCAGTTGCTGTGAAAACTCTGAACCAGGATGGACTCCAGGGTCACAAAGAATGGCTTGCTGAAGTTACTTATCTTGGCGAGCTCGCTCATCCAAATCTAGTGAAACTCATAGGTTACTGCATTGAGGGTTATCAGAGGCTTCTAGTATACGAGTTTATGCCTCGTGGAAGCCTGGAGAATCATCTGTTTAGGAGATCCTTGCCTCTTCCATGGTCTCTGAGAATCAAGATTGTGTATGGTGCTGCAAAGGGGCTTGCATATCTGCATGAAGAAGCCGAGAAGAAAGTTATATTTCGGGACTTCAAAACATCAAATATCCTGTTGGATTCTGATTACAATGCAAAGCTGTCTGATTTCGGACTTGCAAAAGATGGTCCAGAGGGAGACTTAACTCATGTGTCTACTCGAGTCATGGGAACATATGGCTACGCTGCTCCGGAGTATGTGATGACAGGACACCTCACTGCAAAAAGCGACGTTTATAGCTTTGGAGTGGTCCTGCTTGAACTGGTGACGGGGCGAAAAGCCATGGACAAAAGCCGGCCGCACTGGGAGCACAACTTGGTGGAATGGGCGAGGCCGCTGATGATGGACCGGCGAAAGTTCTACAAACTGATGGATCCAAGACTTCATGGCCATTTCTCCAAGAGAGCTGCCTCCAGGGCCATTCACATTGCTAACAGATGCCTGAGTAGAGACCCTAAAGTTAGGCCTCTCATGACTCAGGTCGTGCAAGCCCTGAGTCCTTTGCTTGAGTTCAATGAGACGGCTGTctctgcttctccttctttcCAGATCATCCAGTCCAGTGCTGCAAATCCTCATCCAACTAATATAGCCTCATCATCATccactcctcctcctcctcctgctgctgctgctgcttcttcttcttcaaggaGCTTACCCACCTCTCCTTTTTGCCCTCTCTATGCTCTTCCATCTCCCAATACTCCTAATAATAACCATTGA 1332 0.4467 MALNGEGDIVGTSKANKKKDRPSGCWMKLSFIGSCGFLKSKLSTSGKNKSIVSGNASSSRNINDGVEMQFSSNLRRFSFSELKSVTRNFKADSIIGEGGFGIVFKGWLSQVRSSSSSGMIPVAVKTLNQDGLQGHKEWLAEVTYLGELAHPNLVKLIGYCIEGYQRLLVYEFMPRGSLENHLFRRSLPLPWSLRIKIVYGAAKGLAYLHEEAEKKVIFRDFKTSNILLDSDYNAKLSDFGLAKDGPEGDLTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLELVTGRKAMDKSRPHWEHNLVEWARPLMMDRRKFYKLMDPRLHGHFSKRAASRAIHIANRCLSRDPKVRPLMTQVVQALSPLLEFNETAVSASPSFQIIQSSAANPHPTNIASSSSTPPPPPAAAAASSSSRSLPTSPFCPLYALPSPNTPNNNH 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1974 443 PANTHER OS01G0588500 PROTEIN-RELATED 43 421 - -
Sto8g1974 443 MobiDBLite consensus disorder prediction 1 22 - -
Sto8g1974 443 Gene3D Transferase(Phosphotransferase) domain 1 173 388 - -
Sto8g1974 443 CDD STKc_IRAK 95 370 - -
Sto8g1974 443 Gene3D Phosphorylase Kinase; domain 1 63 172 - -
Sto8g1974 443 ProSiteProfiles Protein kinase domain profile. 89 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1974 443 SUPERFAMILY Protein kinase-like (PK-like) 71 397 IPR011009 -
Sto8g1974 443 MobiDBLite consensus disorder prediction 392 424 - -
Sto8g1974 443 ProSitePatterns Protein kinases ATP-binding region signature. 95 125 IPR017441 GO:0005524
Sto8g1974 443 PANTHER TYROSINE KINASE FAMILY PROTEIN 43 421 - -
Sto8g1974 443 Pfam Protein tyrosine and serine/threonine kinase 91 367 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1974 Sto-Chr8 12748464 12750879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1974 58 367 Glycoside Hydrolase AT3G07070 54.286 5.43e-115 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto8g1974 PK_Tyr_Ser-Thr 6.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1974 - - pop:7472558 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1974 8 12748464 12750879 Sto3g1523 3 11257400 11261629 ECH
Sto8g1974 8 12748464 12750879 Sto12g0880 12 5510661 5512827 ECH
Sto8g1974 8 12748464 12750879 Sto8g1974 8 12748464 12750879 ECH