Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1965 ATGCCTAACATCTTTCTGCTCCTATGTTTCCTCCTTGTGGTTGATTCTGGCTTTGTGTTTGGCAAGCAAGAAATTGGGATATTTGAGCTCAAGAAAGGTGACATTTCTTTGAAGGTCACCAACTGGGGTGCTTCACTTGTATCTCTGGTTCTTCCTGATAAGCATGGAAAGCTAGGTGATGTTGTTCTTGGATATGATTCAGTCAAGGATTACACTAACGATACAACATACTTTGGTGCGACTGTTGGTCGTGTTGCTAATAGAATTGGAGGCGCTCAGTTTATCCTGAATGGGATACATTACAAAATAGTTGCAAATGAAGGAAACAACACACTTCATGGTGGACTGAGAGGATTTAGTAAAGTTGCATGGGAAGTGAAAAAGTACAAGAAAGAAGCCCAAAATCCCACTATTGTCTTTGCATACCGAAGTTTTGACGGTGAAGAAGGATTTCCCGGTGACCTTGTGGTGTCAGTGAGGTACACTCTACTGGGGAAGAACCAATTATCCATAATCATGAAAGCAAAAGCTCTGAACAAGCCCACTCCCGTGAATCTAGCCAACCACGCATACTGGAACCTCGGGAACCACAACAACGGCAACATTCTGAGCGAAGTGGTTCAGATATTTGCATCTAACTACACACCCGTCAATTCCCACCTCATTCCCACTGGCCAAATTGCTTCCGTCAGAGGAACCCCTTATGATTTTCTGACCCCACAAAGAGTGGGAGCCAGGATCAACCAGATGCCTCAAACCAGAGGGTATGACATCAATTACGTgcttgatgatgatgagaaggggaagaagatgaagaaggtaGCGATAGTGGAAGATGGTAGGTCAGGGAGGGTGATGGAGGTGTTCACAAATGCTCCGGGAATGCAGTTTTATACAGGGAATTTTATAAAGGATGAGAAGGGGAAAGCGTTGAATGAGTTTCAGAGTGTCATGGCATTGTCAAATTTCAAGTATGTTGTAGGAATAGGATCAGCTTGGTACACCTTACTTgtaatctttttcactcatttCGCCAATGCCGCATTATCTAAATCATCGTCGTCCGCCTCCCTTGAGCTTCAGGCAGAAGCCCGAGCTTTGGTTGAAAGTGGGTGGTGGAGTGAGGCCTACACTAAGCGTACGACAAGTCGTTGCGAATGGCCCGGCATTCAGTGCGATAGAAGTGGAAGTATCACTCACATAGCTTTGCCTTCTGAGTTTCAGGTGGGAGATAAGTTCGGGAGACTCAACCTCTCTTCCCTCCCAAATCTCCTGCTTCTCAATCTTTCTAGGCATGCACTCTCTGGGGATGTTCCTTTTGGATTAGGTACCCTTTCCAAACTTCAACATCTTGACCTTTCCTATAATTACATTGATCAACCTATCCTACATTACATTCCTAATCTAACCAATCTTGAAACACTCAACTTGGCAACCAACTTTCTCTTTGACTCAATTCCATCGGATGTAGGTCACTTGACCAAATTGACCTCCATCCTTCTAGATTCCAATAGTATTACTGGGCCCATCCCTCCCGAGTTAGGAAAGTTGAACAAACTGGTTACATTGAGCCTAACTGATAACAAACTGGTTGATTCAATACCTGCGGAGATTGGTCTACTTACCAGTTTGAAATTCTTGTCTCTTGGTATGAACCATTTATGGGGTTCCATACCTTCACAAATTGGGAATTTAAACACCCTTGTTACTTTGGATCTCAATACTAATAATCTCACTGGTGAAATACCTCTAGCTTTGAGTCACCTAAGCAATTTGACTCAACTCAACTTGGCTGAAAATCAGTTATCTGGTGCTTTACCGCAGCAGCTTTCTCAATTAACAAAATTGGAGTCTCTAAATATTTCACATAACCTCATTTCAGCTCAAATACCGCCCGACATTGGAAAATTATCTAGCCTCCTGGTTCTAGATCTGTCTAGAAACAATTTGAGTGGAGACATCCCAACTCAAATTTCAAGTTGCTCTAAACTCAAGACCTTGGTTTTGAGCCACAACCACATATCAGGAACCATTCCCTCCCAGATATGTGGTCTCGTCTCGCTTGCTTTGATTGATCTGAGTTATAACTCAATCGGTGGAGAAATACCTTATCAACTTGGGAACGTGAAAATCTCAAGGGTGTTGGATCTCAGCTATAATGACCTCACTGGAAAAATTCCCAACTCCTTAATTTTACTGCGTAGGATAAACTTGTCCTGCAATTCTCTTGACCATCATATCCCTCTTGGTTTCCGAAATTCTTTTCCATCAGATGCCTTCATTATCGACAAGTATTTCTGTAGCCCCCAAATGCCCCAACAATTGCCTACTCATTCCAGAACAAACAATGGCGTCCCCATCAATTGGAAAATTTTTCTTCCTCTCACAGCTTCCCTTGCAATTCTCTGTTTCGGGTATGTATTCCTCTGCTGGTGGCGTAAGTGCAGAGGATCCAAGTGTGAGGGAAAAGTAGTAAAGAATGGGGATTTGTTTTCAATATGGAACTATGACGGTAAAATTGCATACACAGACATCATTGAAGCAACGGAGGGTTTCGACATTCGATATTGCATAGGATCAGGAGGTTGTGGTCGTGTCTACAAAGCACAGCTACCTAGTGGTAGAGTCGTAGCCTTGAAGAAGCTTCACAATTTGGAAGCTAGCGAGTCCACTTTGTGCGGGATTTTCAAGAATGAAGTGAGAACGCTAGCCAAGATAAGGCATCGAAATATCGTGAGGCTTTATGGGTTCTGCTTACACCAAAAATGCATGTTTCTGGTTTTAGAATACAAGGAAAGGGGAAGCTTATATCATGTTCTGCGAAATGACATCGAAGCTGCGGAATTAAATTGGGGGATTAGGGTGAATATTGTGAGAGGCATAGCACATGCATTATCCTACCTGCATCATGACTATACATCAGCAATCATTCACAGAGATATAACATCCAAAAATGTTCTCTTGAATTCAGAAATGGAGGCTTCTCTCTCTGACTTTGGCATATCTAGACTCATAAATCATGGTTCCTCTCACCGGACATCACTTGCTGGCACTTACGGATACCTCGCACCTGAGCTTGCATACACGAGAGTCGTGACTGAAAAATGCGATGTGTACAGTTTTGGAGTGGTTGTGGTAGAAATAATGATGGGAAGACATCCTGGAGAAGTTTTATCGTCGTTATGGTCAACATCTGCCTCTGCTCAACAACTTCTTCTTAAAGACATATTGGACCCTCGACTCATACCCACCATGAACCAACACGATGTTCATATTTTAGGTGTTGTAGCCACACTAGCTTTTGCATGTCTTCGTCCTAAGCCCAGATGTAGGCCCACAATGAAAAATGTGTCTCAGAAATTGAATTTTGCGATCAATAAGCCTCCCCTGCTGTCCCTGTCTTTCCAGGATATTTCAATCCAGCATCTGCTAAATCAGCAACTATATTTGGTAGATAGATCTGATGATTAA 3471 0.4212 MPNIFLLLCFLLVVDSGFVFGKQEIGIFELKKGDISLKVTNWGASLVSLVLPDKHGKLGDVVLGYDSVKDYTNDTTYFGATVGRVANRIGGAQFILNGIHYKIVANEGNNTLHGGLRGFSKVAWEVKKYKKEAQNPTIVFAYRSFDGEEGFPGDLVVSVRYTLLGKNQLSIIMKAKALNKPTPVNLANHAYWNLGNHNNGNILSEVVQIFASNYTPVNSHLIPTGQIASVRGTPYDFLTPQRVGARINQMPQTRGYDINYVLDDDEKGKKMKKVAIVEDGRSGRVMEVFTNAPGMQFYTGNFIKDEKGKALNEFQSVMALSNFKYVVGIGSAWYTLLVIFFTHFANAALSKSSSSASLELQAEARALVESGWWSEAYTKRTTSRCEWPGIQCDRSGSITHIALPSEFQVGDKFGRLNLSSLPNLLLLNLSRHALSGDVPFGLGTLSKLQHLDLSYNYIDQPILHYIPNLTNLETLNLATNFLFDSIPSDVGHLTKLTSILLDSNSITGPIPPELGKLNKLVTLSLTDNKLVDSIPAEIGLLTSLKFLSLGMNHLWGSIPSQIGNLNTLVTLDLNTNNLTGEIPLALSHLSNLTQLNLAENQLSGALPQQLSQLTKLESLNISHNLISAQIPPDIGKLSSLLVLDLSRNNLSGDIPTQISSCSKLKTLVLSHNHISGTIPSQICGLVSLALIDLSYNSIGGEIPYQLGNVKISRVLDLSYNDLTGKIPNSLILLRRINLSCNSLDHHIPLGFRNSFPSDAFIIDKYFCSPQMPQQLPTHSRTNNGVPINWKIFLPLTASLAILCFGYVFLCWWRKCRGSKCEGKVVKNGDLFSIWNYDGKIAYTDIIEATEGFDIRYCIGSGGCGRVYKAQLPSGRVVALKKLHNLEASESTLCGIFKNEVRTLAKIRHRNIVRLYGFCLHQKCMFLVLEYKERGSLYHVLRNDIEAAELNWGIRVNIVRGIAHALSYLHHDYTSAIIHRDITSKNVLLNSEMEASLSDFGISRLINHGSSHRTSLAGTYGYLAPELAYTRVVTEKCDVYSFGVVVVEIMMGRHPGEVLSSLWSTSASAQQLLLKDILDPRLIPTMNQHDVHILGVVATLAFACLRPKPRCRPTMKNVSQKLNFAINKPPLLSLSFQDISIQHLLNQQLYLVDRSDD 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1965 1156 Pfam Protein kinase domain 857 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1965 1156 Pfam Aldose 1-epimerase 28 309 IPR008183 GO:0005975|GO:0016853
Sto8g1965 1156 SMART LRR_typ_2 589 612 IPR003591 -
Sto8g1965 1156 SMART LRR_typ_2 730 753 IPR003591 -
Sto8g1965 1156 SMART LRR_typ_2 613 636 IPR003591 -
Sto8g1965 1156 SMART LRR_typ_2 662 685 IPR003591 -
Sto8g1965 1156 SMART LRR_typ_2 541 565 IPR003591 -
Sto8g1965 1156 SMART LRR_typ_2 469 493 IPR003591 -
Sto8g1965 1156 SMART LRR_typ_2 517 540 IPR003591 -
Sto8g1965 1156 SMART LRR_typ_2 637 661 IPR003591 -
Sto8g1965 1156 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 363 1140 - -
Sto8g1965 1156 Gene3D Phosphorylase Kinase; domain 1 820 930 - -
Sto8g1965 1156 SMART LRR_sd22_2 661 687 - -
Sto8g1965 1156 SMART LRR_sd22_2 541 567 - -
Sto8g1965 1156 SMART LRR_sd22_2 517 536 - -
Sto8g1965 1156 SMART LRR_sd22_2 613 628 - -
Sto8g1965 1156 SMART LRR_sd22_2 445 471 - -
Sto8g1965 1156 CDD galactose_mutarotase_like 28 309 - -
Sto8g1965 1156 Gene3D Transferase(Phosphotransferase) domain 1 932 1129 - -
Sto8g1965 1156 Gene3D Ribonuclease Inhibitor 356 511 IPR032675 -
Sto8g1965 1156 ProSitePatterns Tyrosine protein kinases specific active-site signature. 976 988 IPR008266 GO:0004672|GO:0006468
Sto8g1965 1156 Pfam Leucine rich repeat 639 698 IPR001611 GO:0005515
Sto8g1965 1156 Pfam Leucine rich repeat 567 626 IPR001611 GO:0005515
Sto8g1965 1156 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 363 1140 - -
Sto8g1965 1156 SUPERFAMILY RNI-like 418 770 - -
Sto8g1965 1156 SUPERFAMILY Protein kinase-like (PK-like) 834 1123 IPR011009 -
Sto8g1965 1156 Gene3D Ribonuclease Inhibitor 512 609 IPR032675 -
Sto8g1965 1156 Pfam Leucine Rich Repeat 713 730 IPR001611 GO:0005515
Sto8g1965 1156 Pfam Leucine Rich Repeat 447 468 IPR001611 GO:0005515
Sto8g1965 1156 SUPERFAMILY Galactose mutarotase-like 17 310 IPR011013 GO:0003824|GO:0005975|GO:0030246
Sto8g1965 1156 Gene3D Ribonuclease Inhibitor 610 775 IPR032675 -
Sto8g1965 1156 Gene3D - 19 324 IPR014718 GO:0030246
Sto8g1965 1156 ProSiteProfiles Protein kinase domain profile. 852 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1965 Sto-Chr8 12705179 12712235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1965 355 761 Receptor kinase-like Gene Family AT4G08850 35.142 9.54e-56 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto8g1965 Aldose_epim 2.7e-77 CL0103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1965 - - aprc:113863342 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1965 8 12705179 12712235 Sto8g1965 8 12705179 12712235 ECH