Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1952 ATGGGATTTGGGAATAATGCAATTCAGGCTGGGAGTTTGGATGTGGGTAAGTCAAATGGAAGGAAGACGAAGAAAGATGGTGCAGAGAAGGAGAGTAGTGGGtgttggcctaaattcagttgcATCGGAAGCTGCATACCTTCGAGATCGAAGATTGATACCTCCATAAGTGGCACTAGTACCCATCATGTGGAAAACAAATCTACAAATGAGAAAACCAAAGACCAAACAGTTGCTCCTCCAGAGTCCTCTACAACTACTAGTAATGCTGGAAGTATTCCCTCCACTCCAAAATTTAGTGAGGAGTTGAAGGTTTCTTCTCGGTTGAGAAAATTCACATTCATTGAGCTGAAATTAGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGCTTTGGTTGTGTCTTTAAAGGTTGGATAGAGGAGAATGGAACTGCACCTGTCAAACCGGAAGGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGAGCTGCAAAAGGTCTTGCCTTTCTTCATGAAGAAGCTCAAAGACCCGTAATATATCGAGATTTTAAGACATCTAATATCCTATTAGATGCGGAATACAACGCCAAGCTCTCGGATTTTGGACTTGCTAAAGATGGTCCTGAGGTTGGAAAGACCCATGTGTCAACAAGAGTTATGGGAACATATGGTTATGCAGCACCAGAGTATGTGatgactgGACATTTGACATCGAAAAGTGATGTCTACAGTTTTGGGGTGGTGCTTCTTGAAATGCTTACTGGCCGACGATCAATTGATAAAAACAGACCAAATGGGGAACACAACCTGGTGGAATGGGCAAGACCTGCACTTGGGGACCGGAGGATGTTCTTCCGAATAATTGATCCTCGTCTCGAAGGTCACTTCTCTATTAAAGGTTCACAGAAAGCCGCCCAGCTCGCTGCTCAATGCCTTAACCGCGATCCAAAATCTAGACCTACGATGAGTGAGGTTGTTCAAGCTCTAAAGCCTTTGCCAAACCTCAAGGATATGGCTATTTCATCACAATATTTCCAGTTCACAAGAGTGGACCGTACTATGTCCATGCCGAATCATAAAAATGGCTTTAAAACACAGTTAGCATCTGTATCAAGGAAAGGTCAACCTGTAAGGACCTTGTCTAGTCCAAATGGCCCTCGTGGCTCTCCATATCATTATTATTCCAAGTCACCAAAACCTAATGGGTGA 1233 0.4282 MGFGNNAIQAGSLDVGKSNGRKTKKDGAEKESSGCWPKFSCIGSCIPSRSKIDTSISGTSTHHVENKSTNEKTKDQTVAPPESSTTTSNAGSIPSTPKFSEELKVSSRLRKFTFIELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPEGPLPLPWSIRMKIALGAAKGLAFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEVGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPALGDRRMFFRIIDPRLEGHFSIKGSQKAAQLAAQCLNRDPKSRPTMSEVVQALKPLPNLKDMAISSQYFQFTRVDRTMSMPNHKNGFKTQLASVSRKGQPVRTLSSPNGPRGSPYHYYSKSPKPNG 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1952 410 MobiDBLite consensus disorder prediction 1 37 - -
Sto8g1952 410 PANTHER RECEPTOR-LIKE KINASE PLANT 58 154 - -
Sto8g1952 410 PANTHER RECEPTOR-LIKE KINASE PLANT 156 402 - -
Sto8g1952 410 ProSiteProfiles Protein kinase domain profile. 1 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1952 410 MobiDBLite consensus disorder prediction 374 396 - -
Sto8g1952 410 Pfam Protein kinase domain 166 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1952 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Sto8g1952 410 PANTHER OS01G0588500 PROTEIN-RELATED 58 154 - -
Sto8g1952 410 PANTHER OS01G0588500 PROTEIN-RELATED 156 402 - -
Sto8g1952 410 ProSitePatterns Protein kinases ATP-binding region signature. 130 152 IPR017441 GO:0005524
Sto8g1952 410 Gene3D Transferase(Phosphotransferase) domain 1 153 340 - -
Sto8g1952 410 SUPERFAMILY Protein kinase-like (PK-like) 107 357 IPR011009 -
Sto8g1952 410 Gene3D Phosphorylase Kinase; domain 1 86 152 - -
Sto8g1952 410 MobiDBLite consensus disorder prediction 53 97 - -
Sto8g1952 410 MobiDBLite consensus disorder prediction 374 410 - -
Sto8g1952 410 MobiDBLite consensus disorder prediction 18 32 - -
Sto8g1952 410 MobiDBLite consensus disorder prediction 73 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1952 Sto-Chr8 12624971 12630094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1952 157 353 Glycoside Hydrolase AT3G07070 57.868 7.52e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto8g1952 Pkinase 2.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1952 - - aprc:113861691 468.774