Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1947 ATGACAATTAAATTAGGAGGCACAAACAAGGCTTGTGCGGCGTGCAAATTCCAGAGAAGAAGATGCTCCAAAGGATGCATTCTGTCTCCCTATTTTCCTGCAGAAGAAGCAGACAAATTTAACAACGTTCACCGTTTGTTTGGCGTCCGTAACATCAAAACAATACTAAATCAAGCATCTCCGGAACAAAGAGACGAAGCCATGAAATCCATTATATACGAATCCGATATTCAAGCGAAGTATCCCATCGAAGGCTGTTTGGGCGTGATGAGACGATATGATATCCTCCTCCGTGACGCTACGGAGGAATTGTATTTACTTAGAATGTTAAAACTTAACCTTACTTCTGGTTATATTGATTACGAATGTCCTTCTCCTAATAGTGTAATACCCATGGATCAACTAtcacaatttattaatttgcctAATTCATCGGTATCTAGAAATGAAGTTAATATTTTCTATAATCATTTGGCGGCTTCCTTGTCTGTTTCTGGTGGCAAGGGAGTCGGAGACAGTATTGATGGTAGTTCTAGTTCTACTGATGGTAGTAGTTCTAGTTCTATTGAGAGTGAAACGGTTGATTCTGACGTTATAGATGTAAAACCTAGTTATTTGGCAGGAGGGGTAGTTTTTAaacaagaagatgaagatgaagatgaattgGATGTTACAGCAGACAACGATGATATTCTTGATGATTCAAATTCAGATGATAAAGATTATATTTCTGGATGGCGTGAAGAAGCACTTGAAGAATTAAGAATAGAATCATTGGTCAAAAGCACAAAAACATCAAGATATAATGAACTTGGTTCCAAGGACGATGCAATTTTGGATCATAAACAGTATTCCTTTGTAAGATGCAAAGAAGAATTTGATTTTGAATCATCATGCAAAAGCAGCAGCAAAAGATATATTGAACGTGGACCTCGAGAATGCAGAATTTATGTTTAA 957 0.3553 MTIKLGGTNKACAACKFQRRRCSKGCILSPYFPAEEADKFNNVHRLFGVRNIKTILNQASPEQRDEAMKSIIYESDIQAKYPIEGCLGVMRRYDILLRDATEELYLLRMLKLNLTSGYIDYECPSPNSVIPMDQLSQFINLPNSSVSRNEVNIFYNHLAASLSVSGGKGVGDSIDGSSSSTDGSSSSSIESETVDSDVIDVKPSYLAGGVVFKQEDEDEDELDVTADNDDILDDSNSDDKDYISGWREEALEELRIESLVKSTKTSRYNELGSKDDAILDHKQYSFVRCKEEFDFESSCKSSSKRYIERGPRECRIYV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1947 318 MobiDBLite consensus disorder prediction 172 194 - -
Sto8g1947 318 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 8 141 - -
Sto8g1947 318 Pfam Lateral organ boundaries (LOB) domain 11 104 IPR004883 -
Sto8g1947 318 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Sto8g1947 318 MobiDBLite consensus disorder prediction 171 194 - -
Sto8g1947 318 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1947 Sto-Chr8 12563909 12566088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1947 1 104 AS2 family AT3G47870 54.808 9.45e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto8g1947 LOB 4.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1947 - - zju:112491466 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1947 8 12563909 12566088 Sto8g1947 8 12563909 12566088 ECH