Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1938 ATGGGAAGACCACCTTGCTGTGATAAATCCAACGTCAAAAGAGGCCTTTGGACTGCAGAGGAAGATGCTAAAATTCTGGCTTATGTATCCAATCATGGCATTGGAAATTGGACATTGGTTCCCAAAAAAGCagGATTAAACAGATGTGGTAAGAGCTGTAGGCTTAGATGGACTAATTATCTAAGGCCTGACCTCAAGCATGATAGCTTCACACCCCAAGAAGAAGACCTTATTATTAACCTTCATGAAGCCAGACTTCCTGGTAGAACAGACAATGATGTGAAAAACCATTGGAACACAAAGCTGAGAAAGAGGCTTATGAAGATGGGGATTGACCCAGTGACCCACAAGCCTGTGTCCCAAGTCCTCTCTGACTTGGGAACTATAAGCCTCCAAAATACCACAACTCATATTCCACCATCACCCACAACCACAGAACTAGATCAACCTCATCATAACCTGCAATTCCAACTCAATATTAACCCacacaataacaataataatgtcCCTAATAATAACAATACTGAAGTTGCATCTTCATGTTCTTCatcaacttcttcttcttcctctaatCTCACACGATTAAGCTCACCCCCACAAGTAATTATTACTCCTCCTccacctcctccttcttcttcctttgatTGGAGCCAATTTCTTCTGAATGATCCCTTCATGTGCACCACAGATCAGTTTCAACAGATGAATCAGTATGAGATTGTAATGcaaaagaaaattcaaaatttcaatgATGCCAACGGCTATAGTATTAATAATGAGCATCACAAGAAATTGGCTGGTGATGAAGAAGCAAGCATGGAGTGGCAAATTAGTAATAAGCAATGTTGTGAAGGGACATTTTCGTCTTCAGATGGTTCGTTTGTGGATGCTATTTTGGATAGGGATAGTGAGATCAGGGCTGCTTTTCCTGAACTCTTGGATGGATCTTTTGAGTActag 960 0.3708 MGRPPCCDKSNVKRGLWTAEEDAKILAYVSNHGIGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLKHDSFTPQEEDLIINLHEARLPGRTDNDVKNHWNTKLRKRLMKMGIDPVTHKPVSQVLSDLGTISLQNTTTHIPPSPTTTELDQPHHNLQFQLNINPHNNNNNVPNNNNTEVASSCSSSTSSSSSNLTRLSSPPQVIITPPPPPPSSSFDWSQFLLNDPFMCTTDQFQQMNQYEIVMQKKIQNFNDANGYSINNEHHKKLAGDEEASMEWQISNKQCCEGTFSSSDGSFVDAILDRDSEIRAAFPELLDGSFEY 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1938 319 SUPERFAMILY Homeodomain-like 11 98 IPR009057 -
Sto8g1938 319 CDD SANT 17 61 IPR001005 -
Sto8g1938 319 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto8g1938 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 106 IPR017930 -
Sto8g1938 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Sto8g1938 319 MobiDBLite consensus disorder prediction 157 199 - -
Sto8g1938 319 SMART sant 66 104 IPR001005 -
Sto8g1938 319 SMART sant 13 63 IPR001005 -
Sto8g1938 319 MobiDBLite consensus disorder prediction 157 214 - -
Sto8g1938 319 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto8g1938 319 Gene3D - 7 67 - -
Sto8g1938 319 PANTHER F14D16.11-RELATED 1 319 - -
Sto8g1938 319 PANTHER F14D16.11-RELATED 1 319 - -
Sto8g1938 319 Gene3D - 68 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1938 Sto-Chr8 12475759 12477611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1938 1 319 MYB Transcription Factor Family AT3G28470 45.977 1.80e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto8g1938 Myb_DNA-binding 2.2e-15 CL0123