Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1926 ATGAATCATAATATTCTCGCGAATGAAAAACCAGCTGCCAACATTGGAAAGAAGAGATTTCACCTTGGAAAGTGCTTCAACAATGGTATCAAGTATATGACGAGTTTGCAGTTCATAGTACTCTTCCACAGTATACTTCCAACCGGGGTCATTATGGGAATGGGGCACCACGAAAACCTTCAATTTCTCGGAATCCCACTCGTTCCCTTTATACGAAACATTCCATCCTTGCGTCCACGCTCCACCTTTCACATCCAGAAACTCAATCTTATCATACAAGTCCTTGGTCGTGATGTCAACACTAGCCGCCAAGACAGAGTAATTCCCGAGATAAGCCAATGCAGGTTTCCGGTTAACGTTCTTCCGATAGCGAGATGCGCGGGATTTGAAGTGAGAAGTGATGGGCCTGGGGACTCCAAGCCGAAGGAGAACGAAGAGGAATACGAAGAGGGTAAACAAGAGGCCGATCGTGAAGAAATTAGCAAAGAAGAAATCCTTGATAGCGATATGTCTTCCTCTCTTCCTCATCAATCTGAATCCACACCGCAGATCTACTGCCGAAAAGACAAGTCTCTCGGATTGCTTTGCTCCAACTTCTTGAAGCTGTATAATCACGACGGAGTTGGGATGATTGGACTTGACGATGCTGCTGCCCGACTAGGAGTTCAGCGCCGCCGCATGTATGATGTAGTCAACATTTTGGAGAGTGTTGGAATTGTAGCTAGAAAAGCGAAGAACCAATATTCATGGAAAGGTTTCGGAGAAATTCCTCGAGCTTTGAATGTTCTTAAGGAAGAGAGTCTGAGAGAAAAATTCGATGCAGCCTACCGCAGTTCAGCTGATGCTTCGAAGAACAAAGAAAATGGTGGACTTGAATCTGATAGCGAGGACAATCCCTTGACGTCATCCAAAACTGACAGCTGCAGAAGAGACAAATCTCTAGCACTCTTGACagagaaatttataaaactctTCCTTTGTTCAGATGTTGACGTTATCTTGCTTGAAGATGCGGCAAAGAACATGCCGGGCGATGCCCAGAATTCAACTGCCTTGAGAACAAAAGTCAGACGTTTATATGACATAGCGAATGTTCTATCCTCTATCAATCTGATTGAGAAGACAAATCATCCTGAAAATAGGAAAACAGCATATAGGTGGTTGGGAGGGAAAGCCAGTAGAGGATCTGAAGATACCCTGCATCAGCGTGCATCCAAGAAAAGAGTGTTTGGAGCTGAAATTACGAATTCTAGTTTAAAGAGAAGCCGAACAGATCCGTTAATGGATTCACAGTTGCATAACGAGAACAAGCCTGTGTATGAAAACCAAGTTGGGTCGGAAAATGTAAACATGGGTAAAACATTGGAGCACCCACCTAAAAGCAATTCAAAGGCCATAGATTTTGGCCCTTTTGCCCCTAGCAAACTTAGAAGAGATGATCCAGAGCATAGACCAATGAGACAAGTTCATGACATGGAGAATATGATTTCTAAACACCGCCCTGAGTATCACAACCAAGCTCTGAGTGAACTCTTTGGTCATTACGTGGATGCGTGGAAGTCGTGGTATGTCGAGGCAGGTGCGCAGCAACAGACATCTTGA 1602 0.4395 MNHNILANEKPAANIGKKRFHLGKCFNNGIKYMTSLQFIVLFHSILPTGVIMGMGHHENLQFLGIPLVPFIRNIPSLRPRSTFHIQKLNLIIQVLGRDVNTSRQDRVIPEISQCRFPVNVLPIARCAGFEVRSDGPGDSKPKENEEEYEEGKQEADREEISKEEILDSDMSSSLPHQSESTPQIYCRKDKSLGLLCSNFLKLYNHDGVGMIGLDDAAARLGVQRRRMYDVVNILESVGIVARKAKNQYSWKGFGEIPRALNVLKEESLREKFDAAYRSSADASKNKENGGLESDSEDNPLTSSKTDSCRRDKSLALLTEKFIKLFLCSDVDVILLEDAAKNMPGDAQNSTALRTKVRRLYDIANVLSSINLIEKTNHPENRKTAYRWLGGKASRGSEDTLHQRASKKRVFGAEITNSSLKRSRTDPLMDSQLHNENKPVYENQVGSENVNMGKTLEHPPKSNSKAIDFGPFAPSKLRRDDPEHRPMRQVHDMENMISKHRPEYHNQALSELFGHYVDAWKSWYVEAGAQQQTS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1926 533 MobiDBLite consensus disorder prediction 279 306 - -
Sto8g1926 533 MobiDBLite consensus disorder prediction 135 160 - -
Sto8g1926 533 MobiDBLite consensus disorder prediction 132 160 - -
Sto8g1926 533 PANTHER E2F TRANSCRIPTION FACTOR-LIKE E2FF 172 525 - -
Sto8g1926 533 Gene3D - 181 255 IPR036388 -
Sto8g1926 533 Gene3D - 304 391 IPR036388 -
Sto8g1926 533 MobiDBLite consensus disorder prediction 456 482 - -
Sto8g1926 533 PANTHER TRANSCRIPTION FACTOR E2F 172 525 IPR015633 GO:0000978|GO:0006357
Sto8g1926 533 Pfam E2F/DP family winged-helix DNA-binding domain 311 389 IPR003316 GO:0005667|GO:0006355
Sto8g1926 533 Pfam E2F/DP family winged-helix DNA-binding domain 188 252 IPR003316 GO:0005667|GO:0006355
Sto8g1926 533 SMART E2F_TDP_2 187 252 IPR003316 GO:0005667|GO:0006355
Sto8g1926 533 SMART E2F_TDP_2 309 389 IPR003316 GO:0005667|GO:0006355
Sto8g1926 533 SUPERFAMILY "Winged helix" DNA-binding domain 187 250 IPR036390 -
Sto8g1926 533 SUPERFAMILY "Winged helix" DNA-binding domain 311 389 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1926 Sto-Chr8 12359995 12367133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1926 183 526 E2F-DP Transcription Factor Family AT3G01330 47.414 2.57e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Sto8g1926 E2F_TDP 2.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1926 - K09391 lang:109346387 403.29