Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1914 ATGGCGGGCGGAACTGAAGCCTTCCCAGATTTAGGAAAACACTGCCAATTTGACGATTGCCACCAACTTGATTTCCTCCCCTTCACATGCGACGGCTGCCGACATGTATTCTGTCTCGACCACAGATCTTCCAAGTCCCATGATTGCCCTAAATCCGACCACAAGAGCAGGAAGGTTGTGGTGTGCGAAACATGTTCCATGTCCATCGAAACCACCGGCCGCGACGGAGAAGACGAGAAGGCAATCTTGGAGAGGCACGACAAGTCTGGAGATTGTGAccccaagaagaagaagaaacccaCTTGTCCCGTTAGGAGGTGCAAGGAGGTTTTGACGTTTTCGAATACCAGCACGTGCAAAACGTGCCAGTTGAAGGTGTGTCTCAAGCACCGTTTTCCTGCCGATCATGCTTGCCAAAAggtttcttcatcttcctcgtcACAAGTTAAAGCTGTTAATGGACGATGGAATGATAGTTTCTTGGCTGCTTTGGCGTCAAGGAATAAACAAGACTGTGCCAAGGGTTCTAAGTCTCCTCGTCCTCCTTCTTCTAGTACTCCATCTATTAAAGCCTGCTGA 579 0.456 MAGGTEAFPDLGKHCQFDDCHQLDFLPFTCDGCRHVFCLDHRSSKSHDCPKSDHKSRKVVVCETCSMSIETTGRDGEDEKAILERHDKSGDCDPKKKKKPTCPVRRCKEVLTFSNTSTCKTCQLKVCLKHRFPADHACQKVSSSSSSQVKAVNGRWNDSFLAALASRNKQDCAKGSKSPRPPSSSTPSIKAC 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1914 192 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 5 177 - -
Sto8g1914 192 Gene3D - 77 155 IPR035896 -
Sto8g1914 192 Gene3D - 2 68 IPR035896 -
Sto8g1914 192 MobiDBLite consensus disorder prediction 169 192 - -
Sto8g1914 192 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 5 177 - -
Sto8g1914 192 Pfam AN1-like Zinc finger 102 141 IPR000058 GO:0008270
Sto8g1914 192 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Sto8g1914 192 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Sto8g1914 192 SUPERFAMILY AN1-like Zinc finger 5 58 IPR035896 -
Sto8g1914 192 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Sto8g1914 192 SUPERFAMILY AN1-like Zinc finger 94 144 IPR035896 -
Sto8g1914 192 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Sto8g1914 192 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Sto8g1914 192 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1914 Sto-Chr8 12288256 12288834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1914 2 172 C2H2 Transcription Factor Family AT3G28210 63.158 6.28e-79 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1914 - - qsu:112006707 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1914 8 12288256 12288834 Sto8g1914 8 12288256 12288834 ECH