Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1903 ATGCATGGGTCGGGAGGTGAGGAGTGGAAACACAGGCGGCACATGTGGCCGGTCCCTGCCACCGCGACGACTGTAGCTCCCGCTGCCGATTCTTCATCATCTGAATTCATATGCAAGGACGGACGCAAGATTCGTGTTGGTGATTGTGCACTTTTCAATCCACCTCCAGATTCCCCACCTTTTATTGGAATAATTCGCAAATTAACTTTGAAGGAAGAGGAAAGTCCAAGTTTAGAAGTTAATTGGCTTTATCGACCTGCTGATCTGAAGCTTGCAAAGGGGATCTCATTGGAAGCTGCTCCCAACGAGGTCTTTTACTCCTTTCATAAGAATGAAACACCTGCTGCATCTTTACTCCACCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGTGATATCCGCATTTGTCTGTAGGCGGGTGTATGACATTGACAAGAAGCGTGTATGGTGGCTAACTGATAAGGACTACATTAATACAAGACAAGAAATGCATTTAGACAAGACAAGACAAGAAATGCATGGGGCAGTGCAGTCAGGAGGGCGTTCtccaaaacccttaaatggTCCAACATCAACACCATCACTGAAATCTGGTTCTGACAGTGTTCAAAGTAGTTCTTCCTTTGGTTCGCAGGGTAAgggaaaaaagagagaacgGGGTGATCAGGGATCTGATTCGTCTAAGAGGGAGAGGTTAATTAAACCAGAAGATGGTGATACTGGTCAATTTAGGCCAGAAAGCATGTTAAAGTCAGAGATCGCTAAAATTACTGAGAAAGGTGCTCTTGTGGACTTTGAAGGAGTTGAAAGACTTGTACAGCTTATGCAGCCTGACAGTGCTGATAAGAAAATAGATTTGGCAGGGCGAATAATGCTTGCTGATGTCATAGCAGTCACAGATCGGTTTGACTGTCTTGGTTGGTTTGTACAACTGAGGGGTTTGCCTGTGTTGGATGAATGGCTTCAAGAGGTCCATAAGGGGAAAATTGGTGATGCTAGTATGCCAAAGGAAAATGACAAATCTGTTGAAGAATTACTATTAGCTCTACTTCGTGCTTTGGATAAGCTTCCTGTGAACCTTCACGCATTACAGACTTGTAATGTTGGTAAGTCTGTCAATCATTTACGTACTCACAAAAATTCAGAAATTCAGAAGAAGGCTAGGAGTTTAGTAGACACATGGAAGAAACGTGTTGAGGCTGAAATGAATATTAGTGATTCAAAATCTGGTCCTAGCCGTGGTGTTTCTTGGCCAGCAAAGCCTGCATCATCTGAAGCTTCTCATGTTGGAAGTAGGAAAAGTGGAGGATCTACTGAGATTGTTGCAAAGAGTTCTGCAATGACATCAGCATCTAAGAACTCTCAAGCTAAGATGAGCTCAGGGGATGCTCTGTCTAAGGGCTCTCCATCTGCCGGTTCAACTAAATCAATGACTACCTCTGTGGGCAGTAATTTGAAGGatcaaaactttaaatccttggcTGGAGCTGGGACATCAGATCTACCCCTAACTCCTATTAAGGAGGAAAGAAGCAGCAGCTCTAGTCAGTCTCAAAACAACAGTTTATCCTGTTCTAGTGAACATGCAAAAACCATTGGTTCTTGTAGGGAAGATGCAAGGAGCTCCACTGCTGTGTCAATGAGTGCAAGCAAAATCCCAGGCAGTGCATCTCGCTCTCGGAAGTCAAGCAATGGTCTGCATGGGTCTGCTTTAACTGTAGTTCAAAAGGATCCTCATTCTGGAAAAAATTCAAGCAGAAACTCGCCTTCTGAGAAGCTGTCACCAACTCAACAAGCCCATGAAAAATCATCTGATGTGTCACTTGCTGATCATGGGAATAATCAGCGACTCATTGTCAAGTTGCCTAACACTGGCCGTGGTCCTGCCCAGGGATCCTGTGGGGGGTCTGGTGAAGATCCTGCTGTTCTGTCGGGCAAAGCCTCATCTCCTGGAGATAAGCACGAGAATCTGGACAGAAAAGTGAAATTGAAAACTGATGGTTTTCAGACTAATAATGTCTCGAATATAGCTGTTGATGTTTGTAATGCTAATGAACCTGTGATTGGTTATGAGGAACCTAATGGCTCATCAGCAGGCGAAGGAGGCAGGACTAGTGAAGATGGTGATAAGGTTGCAGAGACATTAAAACCCACTAGTTTATCTGGATTTGTTTCAAGATCAGGGCAAACCTATGATGCTTCTTTAAGCTCCATAAATGCATTAATTGAAAGCTGTGCAAAATTTTCTGAAGCAAGTCCCTCTGTGTCCCCTGGCGATGATGCTGGGATGAATCTGCTTGCTACTGTGGCTGCTGGGGAAATATCTAAATCAGAAAATGTGACACCAGTGGTTTCTCCTGGAAGGAAGTCTCCTGTGGCAGATGAATCATGCTCAGGCAATGATGATAAGTTACATCATTCAGGTGGAGCAGTTGCTCGCACACTTGAACAAGCCAATGGTGGGGCTCCTGTAGATGTTGTAAACACCATTGATTCTTTGCAGTTCAAGGATGATGAAAGACATTCTGTAGCACCAAGGTTGGGTGAGGTATCTGGAGATGGTGAAGCTACTCCATCTGGTTTTGTAGAGAAAACTGGTGATGGTAGAAATAAAACTAATTCTTCTACAGATTTGTTACATAATGCTCCTGGCCCATGCTTAAGGCCTGAAACCAAAGAGGACACCTCTGAAAATGTATCGTGTGCTAAAAAGGAGAGTACTGCTGAGCCCAATAGTTCTGACTctaaattaaaatcaaagacCTCTATTGATGAAGATCAGAAGGTTGATCATGTTGATGAGAGGAACACAGAGAATGAATCCTCAGTTTCAGAATGGCCTGGAGCAAATCTAAAGATTGAGAAGGAAGGATGTGAAAAATCATCTGAACCATCCTCAGGTGTGGGTGATGAAAGCCTTATTAGTGCAGAGAAAGTGACAGGTATTTGCGTCACAGTGGAAAAGACATCTTCTCTTGCAGAAAACTGTGAATCTCTTGAGGCAAAAAATGAGAATGGCTTTGTTCCACCTTCTGCTTCAAGTAATCCATTGATGGAGTCTAAGACTGAAAATGCTGATGACATAAAGCCATGTGAGGTAGAGCATAATAATGAAAGACAAAAGGATCTGGACTCATCCAGTCTTGCTGGTAACTCTCATTGTGGTGAAGAGAATTTGGATCGAAAAGAGGCTTTTGGTCTCTGCTCTGGCTCATCAGTTCATTCAGAGTCAGCAAAAGATCCTGTACTGGAGCATGAAGCGCACAAAAAACCTTCTGGGCTTAATTTGGACAGAGTTGCATCCGATGGTGCAGGAGAACGACATGCATCTATTGTTAGTGATTCACTTACTACCACAGGGTCTGACATAGCAGTAATGCTGGACTTCGATTTGAATGAGGGATTTCCTGTTGATGATGTTAGTCAAGTGGAGGTTGCAAGACAGGAAGAACCTATCACATCATCTGCTGTCCATGTGCCTTGCCCATTGCCTTTTCCCATTCCTTCCATGTCTGGGGGCTTCCATGCTTCTATTACTGTAGCTTCTGCTGCCAAAGGGCCTGTTGTTCCCCCAGAGAATCCATTGCGGAGTAGAGGGGAACTTGGATGGAAAGGGTCAGCTGCTACTAGTGCATTTCGACCTGCCGAACCCAGGAAAAACACAGAGCAGCCATTAAATTCTAGTGATAACAGTGCTACCAAGCAAGGCCGGGCTCCTTTAGATTTTGATTTAAATGTGCCAGATCAAAGAAGTTTTGAGGATGTGGCTTCCCATGGTTCGTCAGAGACTTGTTTAGAATCAATGCCTCGTGATCGTGGGACTGCAGGGCTTGATCTTGATTTGAATCGAGTTGATGAGACTCCTGATTCTGTGTCTTTGTCTATGAACAAACTGGATATTCCTTCTTTACCAAGTAAACCTTCGTTGTCTGGTGGATTATCCAACGGTGGAAATGTCTCTAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGATGAAGTAGGCACTGAAGCCCCTGCTCGTACCCAACAGATAAAAAGTACTGTACCTTTTCCATCAGCTGTTCATGGTGTACGGACAAATaatgttgaatttgggaattatTCGTCCTGGTTTCCTTCAGCCTCCTATTCTGCAATCAATGTCCCACCACTTTTACCTGGTAGAGGAGAACAGAGTTTTGTTTCAAGTGCCGGGGCACAACGGATTTTGGGTCCTCCAGGTAGCACATCTTTTGGTCCTGAAATCTACAGGGGGTCAGTGCTTTCATCTGCTCCAGCTGTTGCTTATACACCCAGTACGCCATTTCAGTATCCAGGATTTCCTTttgaaacaaattttcccttGTCTTCAAATTCCTTTTCTGGCTGTTCAACAGCGTTTATGGATTCCTCAACAGCTGGTGGACTTTGCTTTCCTACAATGCCCTCACAGCTGGTAGGGCCCGGTGGTGTTGTGTCATCCACTTATCCCCGTCCTTATGTTATGGGTCTTCCAGGTGGTACAAGTAATGTGATACCTGAAAGTAGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCTGGCCCAGGTGGTGCAGATTCGGAACGGAGAGACGACAGATTGCCTTCAGGATTGAGGCAACTTTCAGTCTCTAGTTCCCAAGCCTTGGTGGAGGAACAGATGAAGATGTTTCAGGTGGCAGGGGGTGTATTGAAGAGAAAGGAACCTGATGGTGGTTGGGATGGAGCTGATAGATACAGCAGCTATAAACAACCCTCGTGGCAATAA 4785 0.4357 MHGSGGEEWKHRRHMWPVPATATTVAPAADSSSSEFICKDGRKIRVGDCALFNPPPDSPPFIGIIRKLTLKEEESPSLEVNWLYRPADLKLAKGISLEAAPNEVFYSFHKNETPAASLLHPCKVAFLRKGVELPSVISAFVCRRVYDIDKKRVWWLTDKDYINTRQEMHLDKTRQEMHGAVQSGGRSPKPLNGPTSTPSLKSGSDSVQSSSSFGSQGKGKKRERGDQGSDSSKRERLIKPEDGDTGQFRPESMLKSEIAKITEKGALVDFEGVERLVQLMQPDSADKKIDLAGRIMLADVIAVTDRFDCLGWFVQLRGLPVLDEWLQEVHKGKIGDASMPKENDKSVEELLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQKKARSLVDTWKKRVEAEMNISDSKSGPSRGVSWPAKPASSEASHVGSRKSGGSTEIVAKSSAMTSASKNSQAKMSSGDALSKGSPSAGSTKSMTTSVGSNLKDQNFKSLAGAGTSDLPLTPIKEERSSSSSQSQNNSLSCSSEHAKTIGSCREDARSSTAVSMSASKIPGSASRSRKSSNGLHGSALTVVQKDPHSGKNSSRNSPSEKLSPTQQAHEKSSDVSLADHGNNQRLIVKLPNTGRGPAQGSCGGSGEDPAVLSGKASSPGDKHENLDRKVKLKTDGFQTNNVSNIAVDVCNANEPVIGYEEPNGSSAGEGGRTSEDGDKVAETLKPTSLSGFVSRSGQTYDASLSSINALIESCAKFSEASPSVSPGDDAGMNLLATVAAGEISKSENVTPVVSPGRKSPVADESCSGNDDKLHHSGGAVARTLEQANGGAPVDVVNTIDSLQFKDDERHSVAPRLGEVSGDGEATPSGFVEKTGDGRNKTNSSTDLLHNAPGPCLRPETKEDTSENVSCAKKESTAEPNSSDSKLKSKTSIDEDQKVDHVDERNTENESSVSEWPGANLKIEKEGCEKSSEPSSGVGDESLISAEKVTGICVTVEKTSSLAENCESLEAKNENGFVPPSASSNPLMESKTENADDIKPCEVEHNNERQKDLDSSSLAGNSHCGEENLDRKEAFGLCSGSSVHSESAKDPVLEHEAHKKPSGLNLDRVASDGAGERHASIVSDSLTTTGSDIAVMLDFDLNEGFPVDDVSQVEVARQEEPITSSAVHVPCPLPFPIPSMSGGFHASITVASAAKGPVVPPENPLRSRGELGWKGSAATSAFRPAEPRKNTEQPLNSSDNSATKQGRAPLDFDLNVPDQRSFEDVASHGSSETCLESMPRDRGTAGLDLDLNRVDETPDSVSLSMNKLDIPSLPSKPSLSGGLSNGGNVSRDFDLNNGPGLDEVGTEAPARTQQIKSTVPFPSAVHGVRTNNVEFGNYSSWFPSASYSAINVPPLLPGRGEQSFVSSAGAQRILGPPGSTSFGPEIYRGSVLSSAPAVAYTPSTPFQYPGFPFETNFPLSSNSFSGCSTAFMDSSTAGGLCFPTMPSQLVGPGGVVSSTYPRPYVMGLPGGTSNVIPESRKWGSQSLDLNSGPGGADSERRDDRLPSGLRQLSVSSSQALVEEQMKMFQVAGGVLKRKEPDGGWDGADRYSSYKQPSWQ 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1903 1594 MobiDBLite consensus disorder prediction 217 248 - -
Sto8g1903 1594 ProSiteProfiles TFIIS N-terminal domain profile. 320 406 IPR017923 -
Sto8g1903 1594 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1594 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 1518 1540 - -
Sto8g1903 1594 CDD TFIIS_I 359 404 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 1005 1060 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 1012 1026 - -
Sto8g1903 1594 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 308 416 IPR035441 -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 1569 1594 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 1292 1327 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 906 922 - -
Sto8g1903 1594 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1594 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 510 616 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 1190 1348 - -
Sto8g1903 1594 Gene3D - 26 257 IPR043151 -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 1081 1100 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 1027 1047 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 432 500 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 1225 1240 - -
Sto8g1903 1594 Pfam TFIIS helical bundle-like domain 354 403 IPR017923 -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 1083 1100 - -
Sto8g1903 1594 ProSiteProfiles BAH domain profile. 42 157 IPR001025 GO:0003682
Sto8g1903 1594 MobiDBLite consensus disorder prediction 923 945 - -
Sto8g1903 1594 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 271 407 IPR035441 -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 783 812 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 871 885 - -
Sto8g1903 1594 MobiDBLite consensus disorder prediction 850 977 - -
Sto8g1903 1594 SMART BAH_4 42 157 IPR001025 GO:0003682
Sto8g1903 1594 MobiDBLite consensus disorder prediction 175 251 - -
Sto8g1903 1594 SMART TFS2_5 326 405 IPR003617 GO:0005634
Sto8g1903 1594 MobiDBLite consensus disorder prediction 407 662 - -
Sto8g1903 1594 Pfam BAH domain 43 150 IPR001025 GO:0003682
Sto8g1903 1594 MobiDBLite consensus disorder prediction 188 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1903 Sto-Chr8 12198883 12205264 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Sto8g1903 BAH 8.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1903 - - gmx:112998769 2054.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1903 8 12198883 12205264 Sto8g1903 8 12198883 12205264 ECH