Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1898 ATGGCACGAGTTCCCATGTGGGTATTCCTCGTTTCATGTCTTTTCCTCCTCACCATCACAAAGACAAGCAGTTCTGTGGAGGAAGATGTGAAGACCACAATGATAAGCTTCCTTGAGAAGCTCTCTTCCAGCAATGGCCAACAGGGTGTCTCTGTTCAAACATGGAACAAAGGCTCTGATCCTTGCAAGGATCAATGGCAAGGTGTGGTCTGTGACAGCAGAAACTTATCAGTGACAAGGTTGTTTCTTGATAGGTTCGGTTTTTTTGGAACTCTTGATGTTACTATGTTATGCAACTCTCAGCCTCTTGCTGCTTCTCTTTCAATTCTCAGTATTTCTGGGAACAACCTCAGTGGAGGAGTGGCTCCTGAGATTTCAAAGTGCAAGCAGCTAACACGTTTGATTGTGAGTGGGAATAAGCTTTCTGGGAATCTTCCCACTTCGCTTGCCATGTTGGGAAATCTGAAAAGACTTGACCTTTCAAGCAATGAGTTTTCTGGTGAATTTCCAGACTTGTCCAGTATCTCAGGGCTGAATGTGTTGTATGCTCAGAACAATCACTTCAATGGGAGCATACCCTTGTTTGATTTCTCCAATCTCTATCGCTTCAATGTCTCTTTCAACAATTTCAGTGGCCGGATTCCAGATGTGCAAGGTTACTTTTCTCAAGACAGCTTCTTGGGTAATCCTGAACTGTGTGGAAAACCTTTGACAAGAAACTGTTCTTCTCAGTCTATTAAAGATGACAACTCTGAAGTATCAAATCCACCTAAGGGTGCTTCTAAAGATCAGATTTTGATGTATTCAGGATATGCTGCATTGGGATTGGTGATTATCCTTATTGTAGTTTATAAACTGTGTACAAGAAAGAAGGGTAGTACTGAAGGAGTGAATAAGGTAGCAGCAAGTGGTGATCATGGGAGTGGTAGTATTGAGAAGACTAGCATTAGCAATGCTTCAAGTGGGAACAAATCAGGAACAAGCAGATCTGAGTTGAATTCAATGGCTTCTGAAAGTGGGTTGGTTTCACAATCACTCATAGTTCTGACACAACCAGCAGAAGTGAATGAATTGAGGCTTGAGGATTTGCTGAGGGCTCCTGCAGAATTGCTAGGCAGAGGGAAGTATGGAAGTCTTTATAAGGTGATGCTGGATAGTGGGAAGACGGTGGTTGTGAAAAGGATTAAGGACTTGGCTACTTCCAGCCTTGACTTCAAGAGAAAAATGGAAACTTTGGGCAGAAGGAAGCACCCTTTTGTGCTCTCACCACTTGCTTTCTATAGTTCCAGGCAAGAGAAGCTTTTGGTTTATGAATTCCAGGAAAATGGAAGTTTATTCAAGCTTCTCCATGGTGAATCAAGAAAAGGGTTTGACTGGAGCAGCAGGCTAGCCATTGCATCAACAATATCCGAAGGATTAGCCTTCATGCACCAAGAGCTTCGCGACGAAGGAATAGCACACGGAAACCTAAAATCCTCCAACATATTGCTGAGCCACACCATGGAGGCGCGCATAAGCGAGTACGGCGTCATGGCCGCCGCCATGGACGACCAACAAAGCTCGTCGTCTTTCGCCGCGAGCCCGCACGATCCTCGTAACAACGCACTATTCAAGGCCGACGTGTACGGATTCGGCGTGATCCTGCTGGAATTGCTCACGGGGAAGCTAGTGAAGAGCGACGGGGTGGATTTGACGGAGTGGGTGAAGTCGGTGGTTAGGGAAGAATGGACAGGGGAAGTGTTCGATAGGTGTTTGATAGCAGAGTATGCGAGTGAAGAGAGGATGGTGAATTTGCTTCAGGTGGCTATTAAATGTGTTCATCGCTCTCCGGAGGCTAGGCCGAGTATGAATCAGGTGGCTCTCATGATTAGTACTAtcaaggaggaggaggagaaatcTTTGATCTATGAAGTATGA 1917 0.4465 MARVPMWVFLVSCLFLLTITKTSSSVEEDVKTTMISFLEKLSSSNGQQGVSVQTWNKGSDPCKDQWQGVVCDSRNLSVTRLFLDRFGFFGTLDVTMLCNSQPLAASLSILSISGNNLSGGVAPEISKCKQLTRLIVSGNKLSGNLPTSLAMLGNLKRLDLSSNEFSGEFPDLSSISGLNVLYAQNNHFNGSIPLFDFSNLYRFNVSFNNFSGRIPDVQGYFSQDSFLGNPELCGKPLTRNCSSQSIKDDNSEVSNPPKGASKDQILMYSGYAALGLVIILIVVYKLCTRKKGSTEGVNKVAASGDHGSGSIEKTSISNASSGNKSGTSRSELNSMASESGLVSQSLIVLTQPAEVNELRLEDLLRAPAELLGRGKYGSLYKVMLDSGKTVVVKRIKDLATSSLDFKRKMETLGRRKHPFVLSPLAFYSSRQEKLLVYEFQENGSLFKLLHGESRKGFDWSSRLAIASTISEGLAFMHQELRDEGIAHGNLKSSNILLSHTMEARISEYGVMAAAMDDQQSSSSFAASPHDPRNNALFKADVYGFGVILLELLTGKLVKSDGVDLTEWVKSVVREEWTGEVFDRCLIAEYASEERMVNLLQVAIKCVHRSPEARPSMNQVALMISTIKEEEEKSLIYEV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1898 638 SUPERFAMILY L domain-like 54 220 - -
Sto8g1898 638 MobiDBLite consensus disorder prediction 297 334 - -
Sto8g1898 638 SUPERFAMILY Protein kinase-like (PK-like) 369 622 IPR011009 -
Sto8g1898 638 MobiDBLite consensus disorder prediction 308 334 - -
Sto8g1898 638 Pfam Protein kinase domain 369 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1898 638 Pfam Leucine rich repeat N-terminal domain 37 72 IPR013210 -
Sto8g1898 638 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Sto8g1898 638 Gene3D Transferase(Phosphotransferase) domain 1 441 637 - -
Sto8g1898 638 PANTHER OS05G0588300 PROTEIN 2 637 - -
Sto8g1898 638 ProSiteProfiles Protein kinase domain profile. 365 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1898 638 Gene3D Phosphorylase Kinase; domain 1 337 439 - -
Sto8g1898 638 Gene3D Ribonuclease Inhibitor 30 243 IPR032675 -
Sto8g1898 638 PANTHER OS10G0387400 PROTEIN 2 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1898 Sto-Chr8 12153764 12156348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1898 52 627 Receptor kinase-like Gene Family AT1G68400 37.296 2.20e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto8g1898 Pkinase 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1898 - - gmx:100813796 737.643