Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1894 ATGGAGAGCCCCCAGAGTGCAGTATTGGAAGAGAAGGTAGGTTTATTTGGGATGCTGAAAGAAGCTATTAAAATCCCTTATAAGAATCCCACCTTCATCATCTTCACCTTCATCACTTCTCTCCCCATGTTCTACTCTTTATTCATCTACGAGACCATCTATCTCCAAACCATGACCGAAGCGCTCAGGGTTTTACAGAAGCAACTTGACCACTCAGATAATTGCTTCTTCTGCTTCGCCTGGCAGCCCTTGGAAGCAGTGGATACATTAATAGGGAAGGTTTCTCATAACTTTCTCCTTTTGCTGATTTCACATCTAGGGATCCTCCATTTCTTAGACCTAATCAACACTATTGCCACTGTTAACTCAGCATCATCCATATACGCAGGGGAGGAGGAGGCATTGACTCTCAAACAAATGTTCGTCAAACACCTAATGGACTCCAGATTCAAAGAGCCTCTCGTCACATCCGTGTGTGTTCTTCTGTTGACTTCATTATTATCAATGGGGCTGATTTCTATTGCTGTGTATGCATATATCACACACGTATCTCCTTTTTTCACTATGTTATTTGTGGCCATGTTTGTGGCTTTGTTGATACAGTATGTGAGGTGGAGTGCCATATGGAACTTGGGCACTTTGATTTCCATAGTGGAAGGGAAAGTAGGTGATGAGGCTTTGTTGGTGTCTTCATATATTAGTAGAGGTAATAGGCGAAGTGGAAGCCTCTTGATGCTTGTCTGTCTTGTGTGGAGGCTTTGCTTGAGAGTGGTATTGGTGTACTTATTCACGGGATGGGAATGGGATGTGAATCAAATGCTTTTTCTGATTAATAATGTATTGCATGCAATGTTTCTTTATACGAGAAATACTGAAGTTGGTACACTGACACTTGCTGTGATGTTCCCTGTTATGGCGGCCATCACTAATATTGGCTTCTCATCTGATTCTTTCAATATTAATAGCCTTATAGTGCGTCACTCCTGTCCTAGTGAACTATCAAATGCAAGGACTCTCCGATACTGCAGGAGTCAGCAAGCCATGGCTACTCGAATTCTTTCCTCTCTGCATTATTCTGTAGCTTCTTCTTCTGCCTCTGCTTCCAAACGTGGTTTGGGTAATACTACTCTCTCTTTCTTCAAGCTTCTAGCTTTATGCAAGGAGGGTTTTGAAGTTTCTTGGTTCTATTCTATATGTCTTTGTTGCTGGGTTAGAGGTATGAGCAAAATGGATCAATCTGCTGCTGCTGCAACTGTTGAGGAGCCTATTATACCACAAGTTCAAATAGATCATAATCAACTCCTCATTGATGGACAATTTGTAGATGCTGCTTCTGGAAAAACTTTCCCAACCTTTGATCCTAGGACAGGAGATGTAATTGCTAATGTTGCTGAAGGTGACAGTGAAGATGTAAATCGTGCTGTCTCTGCTGCTCGGAAGGCCTTTGATGAGGGACCATGGCCAAGGATGACAGCTTATGAAAGATCACGTATAATGTATCGCTTTGCTGATTTACTGGAAAAGCACAATGACACAATTGCAGCACTTGAAACATGGGATAATGGGAAGCCTTATGAACAGGCAGCAAAGGTTGAAATACCTATGGTGACGCGCGTGTTTCGATATTATGCTGGGTGGGCAGATAAAATTCATGGTCTCACAGCGCCAGCTGATGGACCCTACCATGTCCAAACCTTGCATGAACCGATTGGAGTAGCAGGCCAAATTATTCCTTGGAATTTCCCTCTTGTTATTTATTCATGGAAGGTTGGGCCTGCTTTAGCAAGTGGTAATACAGTTGTTCTGAAAACTGCAGAGCAGACACCTCTCTCTGCTCTCTATGTCTCAAATCTATTCCATGAGGCTGGACTTCCTCCTGGAGTTCTAAATGTTGTCACTGGCTTTGGTCCTACTGCTGGTGCAGCTCTATGTAAACATATGGATGTTGACAAGCTTGCTTTTACAGGATCCAGTGGCACTGGTAAGAGAGTAATGGCATTTGCAGCGGAAAGTAATATGAAACCAGTGACTCTGGAGCTAGGAGGAAAGTCTCCTTTCATTGTGTGCAAGGATGGTGATGTTGATGCGGCTGTGGAGGCTGCACACACTGCTCTGTTCTTTAATCAGGGCCAATGTTGTTGTGCCGGTTCTCGCACATTTGTTCATGAAAGCATATATGATGAGTTTGTGGAAAAAGCAAAAGCCCGTGCccttaaacgtgttgttggagATCCTTTCAAAAGTGGGGTTGAGCAAGGTCCTCAGATTGATTCCATGCAATTCGAGAAGATCCTCTCCTACATAAGATCAGGCATTGAAAGTGGTGCTACTCTTGAATCTGGTGGTCAAAGAAGTGGCTCCAAAGGCTACTACATCCAACCCACTGTTTTCTCAAATGTTCAGGATGACATGCTGATAGCGAAAGATGAGATCTTTGGTCCGGTTCAGAGTATCTTGAAATTCAAGGATCTTGATGAGGTGATAAGAAGAGCTAATGCAACACCCTATGGGCTGGCTGCTGGAGTTTTTACTCAGAATTTAGAATATGCACACACATTGTCTCGTGCTTTGAGAGCCGGAACAGTTTGGATCAACTGCTATGATGTATTTGATGCTGCAATTCCTTTTGGTGGATATAAGATGAGTGGGCAAGGGAGAGTAAGGGGAGCCTACAGCCTTAGCAACTACCTGCAAGTCAAGGCTGTTGTAACTGCTTTAAAGAATCCAGCATGGTTGTAG 2739 0.4301 MESPQSAVLEEKVGLFGMLKEAIKIPYKNPTFIIFTFITSLPMFYSLFIYETIYLQTMTEALRVLQKQLDHSDNCFFCFAWQPLEAVDTLIGKVSHNFLLLLISHLGILHFLDLINTIATVNSASSIYAGEEEALTLKQMFVKHLMDSRFKEPLVTSVCVLLLTSLLSMGLISIAVYAYITHVSPFFTMLFVAMFVALLIQYVRWSAIWNLGTLISIVEGKVGDEALLVSSYISRGNRRSGSLLMLVCLVWRLCLRVVLVYLFTGWEWDVNQMLFLINNVLHAMFLYTRNTEVGTLTLAVMFPVMAAITNIGFSSDSFNINSLIVRHSCPSELSNARTLRYCRSQQAMATRILSSLHYSVASSSASASKRGLGNTTLSFFKLLALCKEGFEVSWFYSICLCCWVRGMSKMDQSAAAATVEEPIIPQVQIDHNQLLIDGQFVDAASGKTFPTFDPRTGDVIANVAEGDSEDVNRAVSAARKAFDEGPWPRMTAYERSRIMYRFADLLEKHNDTIAALETWDNGKPYEQAAKVEIPMVTRVFRYYAGWADKIHGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLVIYSWKVGPALASGNTVVLKTAEQTPLSALYVSNLFHEAGLPPGVLNVVTGFGPTAGAALCKHMDVDKLAFTGSSGTGKRVMAFAAESNMKPVTLELGGKSPFIVCKDGDVDAAVEAAHTALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFKSGVEQGPQIDSMQFEKILSYIRSGIESGATLESGGQRSGSKGYYIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKDLDEVIRRANATPYGLAAGVFTQNLEYAHTLSRALRAGTVWINCYDVFDAAIPFGGYKMSGQGRVRGAYSLSNYLQVKAVVTALKNPAWL 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1894 912 CDD ALDH_F2BC 429 904 - -
Sto8g1894 912 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 684 873 IPR016163 GO:0016620
Sto8g1894 912 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 398 912 - -
Sto8g1894 912 SUPERFAMILY ALDH-like 428 905 IPR016161 GO:0016491
Sto8g1894 912 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 446 902 IPR016162 GO:0016491
Sto8g1894 912 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 398 912 - -
Sto8g1894 912 Pfam Aldehyde dehydrogenase family 440 902 IPR015590 GO:0016491
Sto8g1894 912 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 706 717 IPR016160 GO:0016491
Sto8g1894 912 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 678 685 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1894 Sto-Chr8 12111153 12116615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1894 395 912 Aldehyde Dehydrogenase Gene Family AT3G48000 74.181 0.0 830
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1894 8 12111153 12116615 Sto8g1894 8 12111153 12116615 ECH