Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1893 ATGGGATTGCCAAAATATATGTGGCTTGTAATTAGCATTTTTATCCTGATCACCACTAAGTTTGCAGCTTCAGAGACAGGAAATTGCGGCCTCGAAATTAGACCTTCATTGTTCAATGATTCAAGCTGTCAAGAGGGAGACTGGGATGGTTTCCTGCAAAACAACTGTTGTGGAGCAGCATTTGATGCTTATCTCTATGCACTGGGATCGCGAGCAAATCAAACGGGCGAGATTTTCTTAAACTCCACGGAACAAAGGTCCTGTCTTTATGGAATGAAGGCTTTGAAAGATGATGTTTTTGGGTGTGGAATTGAGAAGCTAACAAGTGGTTCTGGTGGATGTTCTGACTTTTCTGTCACTGATGTTGTGAATAAATTTGGAGAAGAGCTTAAGAATTTAGGTAAAAACTGTCAAATTCAGAATGAGAAGGAACCATCATCAATATCATGTCCTTCCTGCATGAATACCTGGAAAGCCATAAAAGGAGCACATTCTGGAAACACCAGTAAGGAAGCAGCAAAAGTTGAAGCTGACCTATGTAGTATTGCTGTACTGGTGTCCCTTATAAGCAGCAAAATTGATGATGACATATACGTTCATGCACTTCAGAGATGCCTTGGAACAAGTAGCTTTTATGGAGAAGACCAAGCATCAGAAGACAATCAGAAGATGAGGAGTAAGAGAGGTATATGGATTGTCATTGGATCAACCATAGCAGTTGTACTGATAATAATACTACCTATCACTGCATACATCTTATATCATAGATGTTTCAAATCAATCCCATCAAAAAATAAAGCATTGGAGGAAGTTATATTGAAGGAAACTTCTTGTCCAAGAGTTTCTCTCAAGGAAGTGTACAATGCCACAAATCATCTAAATGAAATGAATATCATAGGGGAAGGAACTTCTGGAAAGGTTTATAAAGGCACAATGACAAATAATCAGCATGTTGCAATAAAGCACATCATCAATGATGATGCAAACATACAGACCTTTGTCAGGGAAATTACGAGCTTATCGCATGTCAGACACCAAAACCTTGTGGCTTTGCTGGGCTGCTGTGTTGAGGGAGATAAATGTTTCCTTGTTTATGAACTGTGTCCCAATGGAAACCTTTCAGAATGGCTGTTTGGCAAGGGCAAGGTTCTGTCATGGATACAGAGACTTGAGATTGCAATTGATAGTGCTAAAGGTCTTTGGTTTCTACATACGTATCCAGGAGGCTGCATCGTTCACCGTGATATCAAGCCTACAAACATTCTGCTGGGGCCTAAGTTTGAAGCAAAGCTATCAGATTTTGGACTGTCTAAAATTATTGAGGTGGGTGAAACATATGTTAGCTCAGAAGTGAGAGGAACGTTTGGATATGTTGATCCAGAGTACCAAAGCAACCACCATGTAAATTCATATGGTGATGTCTACAGCTTTGGCATGGTACTTCTACAGATTTTGTCAGGGAAGAAGGTCATAAATTTGAAACTAAGGAAACCCATGTCACTGAATAAAATGGCAAGAGCTCTCACAAGGGGTGGGTGCATAACAGAATTTGCTGATCCTAAACTTCAAGGGGAATACTCAGAAGAAGCATTTGATTTTACCCTTCATCTAGCTCTATCATGCACAGCCCTTGACCGAAAACGTCCATCCATGGAGGAGGTTGTCACTAGATTACAAGAGGCCCTACTAATTTCAACCAGGAACAGAAACTCTAGTGGACAATCCTTCTATTCCCAGATAGTGTGA 1746 0.4032 MGLPKYMWLVISIFILITTKFAASETGNCGLEIRPSLFNDSSCQEGDWDGFLQNNCCGAAFDAYLYALGSRANQTGEIFLNSTEQRSCLYGMKALKDDVFGCGIEKLTSGSGGCSDFSVTDVVNKFGEELKNLGKNCQIQNEKEPSSISCPSCMNTWKAIKGAHSGNTSKEAAKVEADLCSIAVLVSLISSKIDDDIYVHALQRCLGTSSFYGEDQASEDNQKMRSKRGIWIVIGSTIAVVLIIILPITAYILYHRCFKSIPSKNKALEEVILKETSCPRVSLKEVYNATNHLNEMNIIGEGTSGKVYKGTMTNNQHVAIKHIINDDANIQTFVREITSLSHVRHQNLVALLGCCVEGDKCFLVYELCPNGNLSEWLFGKGKVLSWIQRLEIAIDSAKGLWFLHTYPGGCIVHRDIKPTNILLGPKFEAKLSDFGLSKIIEVGETYVSSEVRGTFGYVDPEYQSNHHVNSYGDVYSFGMVLLQILSGKKVINLKLRKPMSLNKMARALTRGGCITEFADPKLQGEYSEEAFDFTLHLALSCTALDRKRPSMEEVVTRLQEALLISTRNRNSSGQSFYSQIV 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1893 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Sto8g1893 581 SMART serkin_6 293 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1893 581 Pfam Protein kinase domain 295 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1893 581 PANTHER OS01G0750732 PROTEIN 27 570 - -
Sto8g1893 581 Gene3D Phosphorylase Kinase; domain 1 256 367 - -
Sto8g1893 581 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Sto8g1893 581 Pfam SPARK 26 168 IPR043891 -
Sto8g1893 581 SUPERFAMILY Protein kinase-like (PK-like) 272 558 IPR011009 -
Sto8g1893 581 PANTHER - 27 570 - -
Sto8g1893 581 ProSiteProfiles Protein kinase domain profile. 293 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1893 581 Gene3D Transferase(Phosphotransferase) domain 1 368 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1893 Sto-Chr8 12106151 12108888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1893 280 563 Receptor kinase-like Gene Family AT2G28970 42.561 1.16e-58 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Sto8g1893 Pkinase 7.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1893 - - aprc:113867593 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1893 8 12106151 12108888 Sto8g1893 8 12106151 12108888 ECH