Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1889 ATGGAGCTCACCGGTTCCGGCAACCAGCTCAGAGACCCCGAGCACCCTCAAGATTCTCGCTCTGTACTCCAAATCGACCTCAATAAGATCCCCTCTCCTTCTTCCGTCGAAACCCTACCGGACTCCATCGACATCGTACGCACGTACCACGAGAACCCCGCGCCTCCCCCCGGCGGCCCCGCCGGCATCCCCTCCGATGTTTCGGGCTCCGCTTGTGGTGCCTGTGGTAGGCCGGAGGTTCGGGGTCGCATGGTCGTCTGTGATGGCTGTGAGCGCGGCTTCCATTTGGGCTGCGCGGAAACGCGGGCCCGTCAGGATGTGAGCCCAGACGAATGGGTTTGTGGAGATTGTGTCTCTGGTGGGGTCAAGAGTAAGCGCTGGCCATTGGGAGTCAGGTCAAAGCAGCTGTTGGATATGAATGCTTCGCCGCCCAGCGATTTTGACGGCGAGGGTAGTGAGGAATTGCAGGATTTGAGTGCACATAGCATGTGGCATGCGCTATCTGTGCTTTATGAAGTAAGAGGCCAACGCTTAAAATCTGCTCCCAAAATTAATTTGCATCCTTCAGCTTCCATCttctttattattgtttttctcATCTCTTTTCTTTGCTTTGGAAAACTGTTTGGCCTTCCTTGCCAACTGGCCGCAGTTGCCCTTGATAGCAAAGACTGTAGCCAGCGGCAGAAaAAGCACAATCAGGGTGATAACTCTTTTGGTGCCCCAGTGACATATTCAAACTTCTGCAACTGGAGCGCATTTGCTTTCCAAAACCCATCAGGAGTTGTGGCACATGGTGTTCGAAGGAATTTTGAGGATATATTGAATCATTCTCAATCAATGGCTGGAAGTTGTGATGAGGTAGACATGGATATCCCTCTTGCAACGCATGGGAAGAGTAATAATGCTGCTATTAGGCTACCATCTCGCAATCCAAGTGAGATATTTTTGCATGCTCTTAGAGATTTTATATCAGAAAAGCATGGTGTACTGGAGGAAGGTTGGCGAGTTGAATTTAGACAACCAATGAGCAGCTCAGAAGTGTATGCTGTATACTGTGCACCAGATGGAAAGATATTTGATTCTGTGTATGAAGTAGCTTGTTACCTCGGTCTGATGCCTGACTACAATTTTATGGAATCCGAAATAAGTAGTGAAAAGTCTCTCTCTAGTCTATCCAGAAAAAGAAAGCCAAAAAGAACTCCAGTAGCCAATGGATTATCTGAAAATAGGGGATCCTTAGTAAATAGGCATTTTAAGGATGCTTCTTCAAATGTTTTAAAAGTGGGGTGTCATAGTACATGTGAAAATAGTTCAAAAGCCACAGAAGTTGGAAGAGACGAGGATGATTGCTCTGATCCTCAGCAATTTGCTAATGGATTTCCTTTAAGGTTTGaagatttttttgttctttctttgGGAAAAGTTGATGCTAGACCTTCATATTATGATGTAAACATGATCTGGCCCATTGGTTATAAATCTTGTTGGCATGATAAAATTACTGGATCTCTATTTACTAGTGAAGTTTTGGAGGGTGGTGATTCAGGACCTCTATTTAGGGTCAGAAGGTGTTCTTGTTCTGAATTTTCTGTTCCATTTGGGTCAACCATTCTCTCAGTATCAAATAATTGTCAGTTTGTGGGTCATACTGATGAAGGTGAGAGGAAGACTAATGATGGTACGgattgtgatattgatgaaaGCATCCAGATGATCCTTTCAGACCCTTGCATGCCAACGGATAATGATGTCATGAGCTGTCTTGCAAATTACTCTAGTGAAACATGTGAGGCTCAAACGTCAGACATGTTGCGTCCTATAGCTGGTATAGTTAGCGAGAAAACTAGAAATTTATTATCGTATGACTTGGGCTTGACTGATGAGATTGGTGAGATTTTGGTTGAAGAGCATTCATCATCCTCTGCATGGAGAGTTATTTCTCAAAAGTTAGTTCATGTTTTCAGTGAAATCTGCAAGCAGAAAGGGATTCTCAAGTTCTATTGTAATCATGTTGAGAATGAATTGAGCTTTCGAAAGTGGGATACAGGGGATGCTGACGGTGAAGTGAACTTTACCTCATTGGCCAAATTTTGTGGTTCACCTGGTTCTTTAAGTATGCCAGCATTGATTCAGGCAGACAATGATCTGAAAATTCTTTATGAGGTCTTAGGAAAATGGTTGGATCAGGATAGATTTGGATTAGATGTTGAATTTGTGCAAGAAGTATTAGAGAAGCTTCCTGGTGTCCCAAGCCTCTCGCGGTATGAATTTCTGAATAGAAGAAATAATTGGTCTTCATTGCCAACTGTTGGAAATGGGTTCCTAGTGGTTGAAAGTAGAGATGGATTACAATCTGAGGAAGAAGCCATGCAAGGTTCATGTAGGAGGTCTAAGAAAGTGAAATTGATTGAAGAACATGTTAAGCAAAAGCATTGTCCACCTCCTGGGAAGCCACTGTGCTCTAGGGTTCCTTTTGAACTTGTTGGTGATGTTTTTCAGGCTTGGGAGCTATTAGGGCGATTTCATGAAATTCTGGGACTGAAAGAACCTTTGTCATTGGATGAACTGGAAACAGAGCTCATCAACCCATGGTTTAATGGAACAGATTTTCCTGAGAATTTTGTGAGGGAGACAGAGGGCAGTCAATGTGTATGTTCTCAGGGAACTGATAGTATTAGTGAACCAAACTTGTCCCCTAACTCTGAAGCTGAGCCACCAGTTTCCATAAGAAGTGCCCATGCTTTTATTGAAGTGGAAACAGAAGCTATGAAAGAGGCAACTGCAATCAAGCTTGCATCTTCCACTTACACCAGATGCTGTGGCATAGCTTTGACCAAGGCTCATAATTCATTGCTAGAAGTGCTAATAGGTGAACTGCAATCTAAGGTGGCTGCTTTGGTGAATCCAAATTTTGATCTTGGAGAGACAAGAGCAAGGCGGGGAAGAAGGAAAGATGTTGATAATGCAGTTCCTGCTAAACGAACCAAGCTCAATATGCTTCCTATTAATGAACTGACTTGGCCGGAATTAGCTCGTAGATACATCTTAGCTCTTTTATCAATGGATGGTAACCTTGACTCTGCTGAGATTACAGCTCGTGAAAGTGGTAAAGTATTTCGCTGCTTACAAGGAGATGGCGGTTTGCTGTGTGGCTCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCGCTGTTGCTTGCGGAGGCTACAAAGGAAATTTTTGGTTCTTTGAGCCTAGACAAGAATGTACTTACTTTGGAAGATGAGGAGTCTGATGAAAAGGGTATTTGTGATAATGCTGTAGTAAATGGTGGTAATATTCCTGAATGGGCACAGATGCTAGAACCTGCCAGGAAACTACCAACAAATGTGGGAACTAGAATCAGAAAGTGTGTTTATGATGCCTTAGAGAAGGATCCTCCAGAGTGGGCGAGGAAAATTTTGGAACATTCAATTAGCAAGGAAGTTTATAAGGGCAATGCATCAGGACCAACAAAGAAAGCAGTTCTCTCAGTGCTGGCTGATGTATGTGGTGATGGATTGCAACGGAAGCCCAACAAAGGAAGGAAGACAAAGACCATTATATCTATTTCTGACATTATCATGAAGCAATGCCGTATTGTGTTGCGTCGTGCTGCTGCGGCTGATGATGAAAAAGTTTTTTGCAATTTGCTGGGAACAAAACTAATAAATTCTTCTGATAATGATGATGAGGGGCTTCTTGGATCTCCAGCCATGGTTTCTCGTCCTCTTGACTTCAGGACTATTGACCTAAGATTGGCTGCTGGGGCCTATGGTGGATGTCACGAAGCTTTCCATGAGGATGTTCGTGAGCTGTGGAACAGTGTTCGTATTGCATTTAGGGATCAACCTGATATAGTTGAACTGGCTGAAGAATTGTCCCAGAATTTTGAATTGTTATATGATGAGGAGGTTGTTACTTATGTCCAAAAGTTTGTGGAGTATGCTAAATTGGGGTGTTTAAGTGGAGAaatgagaaaagaagtagaTGATTTACTTGCTTCAACAACTGAAATTCCTAAAGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTTCTGTTATGTGATACTTGCGATGCTGAGTATCATACTTACTGCTTGAATCCTCCACTTGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCCTGTGTCCGCTGCAAAAATACCTTTCAAGATTTTTCAAAACGTACGCAGCCTAAGCCTATTGGCAAGTCTCAGAATAAAAGATTTATGGGAGAAATTACTTCTCGTTACTTGGAGAATTTGACTCATTTGTCAGCAGTAATGGAAGAGAAAGAATACTGGGAGTACAGTGTGCCTGAGAGAACTTTGCTTCTCAAGGTTTTATGTGATGAGTTTCTTAACTCTCCCCTTGTGCGCCAGCACCTTGAGCAATGTGCTGAGTTGTCATCTGAATTACATCAGAAATTGCGTGCTCTTTCTATTGAGTGGAAAAGTCTGAAAAGTAAAGAAGATCTCTTGTCCACAAAAACTACACAAAGTGGCTCATTTTTACTCATGGCTGCTGGGGAAGTTGGTCTCAAACAAGGACCCATAAAATCACTCTCAAATCCTGGTAAATGTTTGGTCCAACCACATACTACAAGTGATGTTCCTAACaattttggggtttttgatGATAGTCTGTCTTCAGAAGATGTTGGTAAAGAGAGTAAGAGGTCTAACAGTGTTAATAAAAACATATGCACATCAAATTCAGAGACAGATGGCCAAAATATAAATTCCACTGATGTAGAGGGACAAGTGAAGAATTCCTGTCCATTTGTGGATGGCAGTAAACTGCCTGCAAGTTCTTTGTCCTATGCAGATTCTCAGTGTATTGATAAATCCAGTAATCCTTCTCACATGCCTCAAAAAATTGATGGCTCTGATGGAACATTTAATATCCAGGGTAACTGGCAGAAACACGAGGGAAGGGATATGTCTCCTCAGATTGCTGCAAGTGAATCAGAACACCGCCACCATGAACTCAATGCTGTTAGGCGTGACATTTCACTACTGCAGGACTCAATAACTAGTGTAGGATCACAGTTGCTGAAGCTCTCTGTTCGCCGGGAATTTTTGGGTATTGATTCCATTGGTCGATTGTACTGGGCTTCTGTTATGCCCAGAGGATGTCCATGTATAGTTGTTGATGCAAGTGCTACAGAGCCACATGCGGGAAGAATGAGAGATAGCAAAGACTCTGTGGGCAAATCTCCTGTCAGACAGAACTATGAACTATCTGGCAGGGATACCTATCAGATATCGGGGCTGATGAAGTCCTCCTCTCCTTTAAAGTCTCAACCAAGTAACGTTTTGAGCTTCACTTCATCATGGGTTGTTTATCAAACCGATTCAGAAATTGAAGAGCTGTTAGGTTGGCTGAAAGATAACAACCCTAAAGATAGAGCATTGAAAGAATCCCTTAGGCTGTGGCAAAAGTCAAGATTCCAAGATATTGTCCATTTACAGACCAACGGTCAGATTGACCACCGAGGACCTTTATCCATgcaaagaaatagaaaagaaaaagtatcaAATTCTCTTGTTATGAAGGCAACTTCCTTGTTGGAGAAGAAATACGGTCCCTTGCTTGAGTGGGATACTACTGAGATTTTGAAGAAGAGGGGTAAGAAGTCCAAAACATCTGTTGATGAAAAATTGTATAGGTGTGAATGCCTGGAAGCCATATGGCCTTCTAGGAAACACTGCATGTCTTGTCACAAAACCTTTTTGAGTGATGTTGAACTAGAGGAGCACAATGATGGCAAATGCTATGCAGGTCATCGGGCCTCTGAAGGGAATAAGGATGTAGGTGGACCTTCAAAGCAAAAAGATGTAAAAAGTGAGATTCGTGGTGAAAAATCCACAGGTGATGCAGAAACATCAGTTCGTTCTGAGCTTAggtcaaatttaattaagttttcaaatAAAGGACCATCATGCCCATATAACTTTGAAGATGTCTGCTCCAAGTTTGTGACAAAAGATTCCAACAAGGAACTTGTTAGAGAAATAGGTTTTATTGATTCAGATGGGGTGCCATCTTTTGTTCCTTACATATCTCCTTATGTCAGTGATTCTACCCTTACTTTATCAACTCTAAAAGAAGGCGATGTTGCCAGTAGTGGGTCCATGGCTTCTGAAAGTCAGCTTTTTCTGGGAAAAACTGATGGAACTGGCACATGCCATGACTTTATGTCTGGATTTTCTCCCAGAAGGTTTGTTGTGAATGAAAACATTAAATCAGGAAAATTAAATAGATTAGTTTTAGGATATTCAGATCAAAAGTATGGAAAGCCATCACTTAATAATTCAGCTTCAGAAATGGGGGTTGATCACTGTTGTGTGGTCCCCTTGTCTTCATTGAGACCATTAGTCGGAAAGGTTTCACATATTCTAAGGCAACTGAAGATCAGTTTACTCGATATGGATGCTGCACTTCCTGATGCTGCTCTAAGACCTTCGAAGGCAAAGTTGGAAAGAAGACATGCCTGGCGAGCATTTGTTAAATCTGCATCAAGTATATACGAGATGTTTCAGGCAACAATTTCATTTGAGGACATGGTTAAGAGTGAGCATTTAAGTAATGACTGGTGGTACTGGTCATCACTCTCAGCTGCTTTCAAATCCTCGACTTTGTCTTCTCTTGCCCTTCGCATATATTCCCTTGATTCAGCCATTTTATATGAGAAAATGTTGTCCAATTCAAGCTTAACCGACAGCTCTGAACAACTTACTGCTTCTGTACTAGAGCAGAAACCGCTGGCAACTTTGGACCCAGAAAAGTCCAAAGCTTGCCGGAAGTCTAGCAGGAAAAGGAAGGAGCCAGATGGTTGA 6897 0.4187 MELTGSGNQLRDPEHPQDSRSVLQIDLNKIPSPSSVETLPDSIDIVRTYHENPAPPPGGPAGIPSDVSGSACGACGRPEVRGRMVVCDGCERGFHLGCAETRARQDVSPDEWVCGDCVSGGVKSKRWPLGVRSKQLLDMNASPPSDFDGEGSEELQDLSAHSMWHALSVLYEVRGQRLKSAPKINLHPSASIFFIIVFLISFLCFGKLFGLPCQLAAVALDSKDCSQRQKKHNQGDNSFGAPVTYSNFCNWSAFAFQNPSGVVAHGVRRNFEDILNHSQSMAGSCDEVDMDIPLATHGKSNNAAIRLPSRNPSEIFLHALRDFISEKHGVLEEGWRVEFRQPMSSSEVYAVYCAPDGKIFDSVYEVACYLGLMPDYNFMESEISSEKSLSSLSRKRKPKRTPVANGLSENRGSLVNRHFKDASSNVLKVGCHSTCENSSKATEVGRDEDDCSDPQQFANGFPLRFEDFFVLSLGKVDARPSYYDVNMIWPIGYKSCWHDKITGSLFTSEVLEGGDSGPLFRVRRCSCSEFSVPFGSTILSVSNNCQFVGHTDEGERKTNDGTDCDIDESIQMILSDPCMPTDNDVMSCLANYSSETCEAQTSDMLRPIAGIVSEKTRNLLSYDLGLTDEIGEILVEEHSSSSAWRVISQKLVHVFSEICKQKGILKFYCNHVENELSFRKWDTGDADGEVNFTSLAKFCGSPGSLSMPALIQADNDLKILYEVLGKWLDQDRFGLDVEFVQEVLEKLPGVPSLSRYEFLNRRNNWSSLPTVGNGFLVVESRDGLQSEEEAMQGSCRRSKKVKLIEEHVKQKHCPPPGKPLCSRVPFELVGDVFQAWELLGRFHEILGLKEPLSLDELETELINPWFNGTDFPENFVRETEGSQCVCSQGTDSISEPNLSPNSEAEPPVSIRSAHAFIEVETEAMKEATAIKLASSTYTRCCGIALTKAHNSLLEVLIGELQSKVAALVNPNFDLGETRARRGRRKDVDNAVPAKRTKLNMLPINELTWPELARRYILALLSMDGNLDSAEITARESGKVFRCLQGDGGLLCGSLTGVAGMEADALLLAEATKEIFGSLSLDKNVLTLEDEESDEKGICDNAVVNGGNIPEWAQMLEPARKLPTNVGTRIRKCVYDALEKDPPEWARKILEHSISKEVYKGNASGPTKKAVLSVLADVCGDGLQRKPNKGRKTKTIISISDIIMKQCRIVLRRAAAADDEKVFCNLLGTKLINSSDNDDEGLLGSPAMVSRPLDFRTIDLRLAAGAYGGCHEAFHEDVRELWNSVRIAFRDQPDIVELAEELSQNFELLYDEEVVTYVQKFVEYAKLGCLSGEMRKEVDDLLASTTEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVRCKNTFQDFSKRTQPKPIGKSQNKRFMGEITSRYLENLTHLSAVMEEKEYWEYSVPERTLLLKVLCDEFLNSPLVRQHLEQCAELSSELHQKLRALSIEWKSLKSKEDLLSTKTTQSGSFLLMAAGEVGLKQGPIKSLSNPGKCLVQPHTTSDVPNNFGVFDDSLSSEDVGKESKRSNSVNKNICTSNSETDGQNINSTDVEGQVKNSCPFVDGSKLPASSLSYADSQCIDKSSNPSHMPQKIDGSDGTFNIQGNWQKHEGRDMSPQIAASESEHRHHELNAVRRDISLLQDSITSVGSQLLKLSVRREFLGIDSIGRLYWASVMPRGCPCIVVDASATEPHAGRMRDSKDSVGKSPVRQNYELSGRDTYQISGLMKSSSPLKSQPSNVLSFTSSWVVYQTDSEIEELLGWLKDNNPKDRALKESLRLWQKSRFQDIVHLQTNGQIDHRGPLSMQRNRKEKVSNSLVMKATSLLEKKYGPLLEWDTTEILKKRGKKSKTSVDEKLYRCECLEAIWPSRKHCMSCHKTFLSDVELEEHNDGKCYAGHRASEGNKDVGGPSKQKDVKSEIRGEKSTGDAETSVRSELRSNLIKFSNKGPSCPYNFEDVCSKFVTKDSNKELVREIGFIDSDGVPSFVPYISPYVSDSTLTLSTLKEGDVASSGSMASESQLFLGKTDGTGTCHDFMSGFSPRRFVVNENIKSGKLNRLVLGYSDQKYGKPSLNNSASEMGVDHCCVVPLSSLRPLVGKVSHILRQLKISLLDMDAALPDAALRPSKAKLERRHAWRAFVKSASSIYEMFQATISFEDMVKSEHLSNDWWYWSSLSAAFKSSTLSSLALRIYSLDSAILYEKMLSNSSLTDSSEQLTASVLEQKPLATLDPEKSKACRKSSRKRKEPDG 2298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1889 2298 Gene3D - 1184 1312 IPR036427 GO:0005515
Sto8g1889 2298 Gene3D - 461 560 - -
Sto8g1889 2298 SUPERFAMILY Bromodomain 1193 1311 IPR036427 GO:0005515
Sto8g1889 2298 MobiDBLite consensus disorder prediction 886 906 - -
Sto8g1889 2298 MobiDBLite consensus disorder prediction 1949 1982 - -
Sto8g1889 2298 ProSiteProfiles Zinc finger PHD-type profile. 69 120 IPR019787 -
Sto8g1889 2298 PANTHER OS02G0192300 PROTEIN 19 2298 - -
Sto8g1889 2298 MobiDBLite consensus disorder prediction 2276 2298 - -
Sto8g1889 2298 MobiDBLite consensus disorder prediction 1 21 - -
Sto8g1889 2298 MobiDBLite consensus disorder prediction 2277 2298 - -
Sto8g1889 2298 Gene3D - 321 413 - -
Sto8g1889 2298 MobiDBLite consensus disorder prediction 1958 1981 - -
Sto8g1889 2298 SUPERFAMILY DNA-binding domain 324 378 IPR016177 GO:0003677
Sto8g1889 2298 ProSiteProfiles FYR domain FYRC motif profile. 673 760 IPR003889 GO:0005634
Sto8g1889 2298 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 19 2298 - -
Sto8g1889 2298 SMART PHD_3 71 118 IPR001965 -
Sto8g1889 2298 SMART PHD_3 1356 1402 IPR001965 -
Sto8g1889 2298 ProSiteProfiles Zinc finger PHD-type profile. 1354 1404 IPR019787 -
Sto8g1889 2298 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 321 390 IPR001739 GO:0003677
Sto8g1889 2298 CDD PHD1_Lid2p_like 1356 1401 - -
Sto8g1889 2298 SUPERFAMILY FYVE/PHD zinc finger 70 129 IPR011011 -
Sto8g1889 2298 Pfam PHD-finger 1356 1404 IPR019787 -
Sto8g1889 2298 Pfam PHD-finger 72 118 IPR019787 -
Sto8g1889 2298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 138 IPR013083 -
Sto8g1889 2298 ProSiteProfiles FYR domain FYRN motif profile. 460 513 IPR003888 GO:0005634
Sto8g1889 2298 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1439 1482 IPR028942 -
Sto8g1889 2298 Pfam Methyl-CpG binding domain 322 375 IPR001739 GO:0003677
Sto8g1889 2298 ProSitePatterns Zinc finger PHD-type signature. 72 117 IPR019786 -
Sto8g1889 2298 MobiDBLite consensus disorder prediction 1567 1603 - -
Sto8g1889 2298 MobiDBLite consensus disorder prediction 886 907 - -
Sto8g1889 2298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1313 1416 IPR013083 -
Sto8g1889 2298 MobiDBLite consensus disorder prediction 1579 1603 - -
Sto8g1889 2298 ProSitePatterns Zinc finger PHD-type signature. 1357 1401 IPR019786 -
Sto8g1889 2298 SUPERFAMILY FYVE/PHD zinc finger 1344 1407 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1889 Sto-Chr8 12071750 12085407 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1889 237 2298 C2H2 Transcription Factor Family AT3G01460 45.641 0.0 1612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Sto8g1889 MBD 3.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1889 K22768 - gmx:100820223 2491.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1889 8 12071750 12085407 Sto8g1889 8 12071750 12085407 ECH