Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1872 ATGGCATCCGATTCGAATTCCACACCATCTCACACAAAAGCTTGGTTCTACACAGAACATGGGGACCCATCACAAGTTCTGAAGCTACATCCTTCGTGGCCCATCCCTGAGCTCGAACCAGACCAGCTTCTCATCAAAGTGGTCGCTGCTTCCCTTAATCCCGTCGACTACAAGAGGATGCTAGATTGGTTCCCAAAAACCGACCCACTCAAGCCTactgTTCCTGGATTTGATGTTGCGGGGGTGGTGGTGAAAGTGGGGAGTGAGGTGAAGAAATTCAAGGTTGGAGATGAAGTGTACGGTGACATCAATGAGGAAGGCATATCCAATCTTAAGACGCTTGGGACTTTATCTGAGTACACTGTGGCTGAAGAGAGACTTTTGGCTCATAAGCCTCCTTTTCTGTCCTTTGTGGAAGCTGCTAGCATTCCTGCTGCCATTGAGACTGCTTATGAAGGCCTTGAGAGAACACAGTTTTCTTCTTCTAAATCCATCCTCGTTCTTGGAGGTGCTGGTGGGGTTGGAAACTACGTCGTTCAGCTTGCGAAGCATGTTTATGGAGCATCCAAGATAGCTGCTTCCGCTAGCACTCAAAAGCAGGAGTTGTTAAAGGAGCTAGGCGTTGACTTGCCTATTGATTACACCAAAACTAATTTTGAAGACCTCCCTGACAAGTTTGATGTAGTCTACGACACAGTAGGAGACGTTGGGGCATTGAAGGCAGTGAAAGAAGGTGGGAAAGTTGTGACTATAATACCTCCTGGATTTGAGCCTGCTATAGTCTTCGTTCTCACTTCCAAAGGATCAATCTTGGAGAAACTAGAACCATTGCCGAACGAGATCGCGGAGCTATGCCTAGTTCATCTTTCGTACCCATACCATGCTTCGGCTTGCTCTGTTTCGTCGTCGTGGAACAGAGCCATCACGGTGGGTTTTAGTAAGCCAGTTGAGTCCATGCCATGGCTCGGGGTACCTGCCAAGACCAACTCACCACAGGAAGATGTGAATTCGGCGAAGAGTGATGTGTTTGATTCGGATAGCCCCACTGGATGA 1053 0.4796 MASDSNSTPSHTKAWFYTEHGDPSQVLKLHPSWPIPELEPDQLLIKVVAASLNPVDYKRMLDWFPKTDPLKPTVPGFDVAGVVVKVGSEVKKFKVGDEVYGDINEEGISNLKTLGTLSEYTVAEERLLAHKPPFLSFVEAASIPAAIETAYEGLERTQFSSSKSILVLGGAGGVGNYVVQLAKHVYGASKIAASASTQKQELLKELGVDLPIDYTKTNFEDLPDKFDVVYDTVGDVGALKAVKEGGKVVTIIPPGFEPAIVFVLTSKGSILEKLEPLPNEIAELCLVHLSYPYHASACSVSSSWNRAITVGFSKPVESMPWLGVPAKTNSPQEDVNSAKSDVFDSDSPTG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1872 350 MobiDBLite consensus disorder prediction 323 350 - -
Sto8g1872 350 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 162 183 IPR002364 GO:0008270|GO:0016491
Sto8g1872 350 MobiDBLite consensus disorder prediction 329 350 - -
Sto8g1872 350 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 277 IPR044626 GO:0016628
Sto8g1872 350 Pfam Zinc-binding dehydrogenase 173 251 IPR013149 -
Sto8g1872 350 Pfam Alcohol dehydrogenase GroES-like domain 40 102 IPR013154 -
Sto8g1872 350 SMART PKS_ER_names_mod 21 250 IPR020843 GO:0016491
Sto8g1872 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 135 257 IPR036291 -
Sto8g1872 350 SUPERFAMILY GroES-like 9 167 IPR011032 -
Sto8g1872 350 CDD MDR_like_2 13 259 - -
Sto8g1872 350 Gene3D - 19 277 - -
Sto8g1872 350 Gene3D - 154 267 - -
Sto8g1872 350 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 2 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1872 Sto-Chr8 11964461 11967041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1872 22 233 Monolignol Biosynthesis Gene Families AT3G19450 25.714 3.69e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1872 K18980 - gmx:100788619 379.793