Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1857 ATGCCtgaaagaaggaggaggaggatacATTTGAgcaaattatattcattttcgtgTATTAAATCTTCTTTTGGAGATGATCATTCACAGATTGGGCAGAAAGGGTACTCAAGGGTCGTATACTGCAATAATCCTGATACCCCAGAAGCAGTTCAGTTGAATTATGGAGGCAATTATGTTTCAACCACTAAATATACAgctttcaattttattcctaaGTCTTTGTTTGAGCAGTTTAGGAGGGTTGCAAATATCTACTTTCTAGTTGTTGCTTGTGTTTCTTTTAGTCCATTGGCGCCTTATACTGCTTTGAGTATTGTTGCACCATTGCTAGTTGTAATTGGAGCTACTTTGGTCAAGGAAGCAGTGGAAGATTGGAGGAGGAGAAAACAGGACATAGAGGCAAACAACCGGAAGGTTAAGGTGTACACAAGAAGCCATTCATTTGTTGAAACCAGATGGAAGAAACTTCGTGTCGGTGATATCATTAAAGTGTGTAAAGATGATTACTTTCCTGCTGATCTTCTTCTGCTTTCATCAAGCTATGAAGATGGAGTTTGCTATGTTGAGACAATGAACCTTGATGGAGAAACAAATCTAAAATTAAAGCATGCTTTGGAGGTGACAGCTCATCTTAATGATGAAATATCCTTTCAAAAGTTTAGGGCAGTGGTGAAATGTGAGGATCCAAATGAAAATCTTTACTCATTTATTGGAGCCTTACACTATGAGGGAAAAGAATATCCACTTTCCTTACAGCAGATTCTTTTAAGAGATTCAAAGTTGAAGAAcactgaatatatatatggtgttgTCATTTTTACTGGCCATGATACAAAAGTGATGCAGAATTCCACTGATCCTCCATCCAAGAGAAGCCAAATTGAGAGAAAGAtggataaaataatatatatccttTTCACTACCTTGGTTCTTATCTCCTCTATTGGCTCAGTGTTTTTTGGCATTGAAACTAAAAGGGATATCCATTCTGGGAGGTACAGGAGATGGTATCTTCGTCCAGACAATACAACGGTGTTTTATGACCCTGAAAGGGCAACATTTGCAGCTATTTTTCATTTCTTGACTGCCCTTATGTTGTATGGATATCTAATTCCAATATCATTGTATGTCTCCATAGAAATTGTGAAAGTGTTACAGAGTATTTTCATTAACCATGATCAAGAAATGTATTGTGAGGAAACGGATAGGCCAACTCGTGCACGCACTTCTAATTTGAATGAGGAACTTGGTCAGGTTGACACTATATTGTCTGACAAAACAGGTACTTTGACATGCAACTCTATGGAATTTGTGAAATGTTCCATAGCAGGTACTCCATATGGTCGTGGTATAACAGAAGTGGAGAAGGCACTTGCAAGGAGAAGGGGGGACGGGGAACCTGATATTGATGGTGAGTCAACTGGTGTCCAGGACCAGAATAGTGATGATGCAGTGGAATCCTCACAACCAATTAAGGGTTTCAACTTTAGAGATGAACGAGTAATGGATGGGCAATGGGTTAATGAACCTCATGCAGATATCAtacagaaattttttcgagtTTTAGCAATTTGTCATACGGCTATTCCAGATGCAGATGAAAAATCAGGCGAAATTTCCTATGAAGCTGAGTCACCTGATGAGGCAGCTTTTGTCATAGCAGCTAGGAGTTTTGGTTTTGAGCTTCTTGCAAGGACACAAACAAGCATATCATTGCATGAATTTGATCATCAGAGTGCAAAAAAGGTTGACAGAATATACGAGCTTCTGCATACCCTAGAGTTCAGCAGTTCCCGGAAGAGAATGTCAGTTATAGTTAGGaatgaaaataatcaattaTTGCTCCTATGCAAGGGTGCAGACAGTGTTATGTTCGAAAGGCTCTCGCAAGATGGAAGGCAGTTTGAGGCTGAGACCAAAGAGCATATTAAAAGGTATGCAGAGGCTGGATTAAGAACTCTCATAGTCACATACCGTGAACTTGTTGAAGAGGAATACAAGTGTTGGGAAGAGGAGTTTTTAAAGGCCAAAACTTCTGTTGCTGCAGACAGAGATGCATTAGTGGATACAGCTGCtgataaaattgaaagaaatttgATCCTTCTTGGTGCTACAGCTGTTGAGGACAGACTTCAAAAAGGGGTTGCTGAATGTATTGATAAGCTTGCCCAGGCAGGAATCAAATTATGGGTATTAACTGGGGACAAGATGGAAACTGCTGTCAACATAGGGTATGCTTGCAGTTTACTTAGACGAGACATGAAACAGATAGTGATCACTCTTGATTCACCAGATGTTCTATCCTTGGAAAAACAAGGGGATAAGGAAGCTCTAGCAAAGGCCTCTCTTGAAAGCATTAAGAAGCAAATCAAAGAGGGAATCTCACAAATCAAGTCTGAGAAAGAGGCTTACACAGATAGAGAAAGCTCTGCTGCATTTGGTTTGATAATTGATGGGAAGTCCTTGGATTTTTCTCTTAACGAGAATTTAGAGAAATCATTTTTTGAGCTGGCAGTTAATTGTTCTTCTGTCATATGTTGCCGATCTTCACCGAAGCAGAAAGCTCTTGTTACAAGATTGGTGAAACTGGGAACAGGCAAGACAACGCTCTCTATTGGCGATGGGGCGAATGATGTTGGCATGCTTCAGGAGGCCGATATTGGAGTTGGCATTAGTGGTGCAGAAGGGATGCAGGCTGTGATGGCAAGTGATTTCGCCATAGCCCAATTCCGTTTTCTGCAACGATTGTTGTTGGTACATGGACACTGGTGTCATAGGCGACTAGCAATGATGATATGCTATTTCTTTTACAAGAACATTACATTTGGACTTACTCTATTTTGGTATGAGGCATATGCCTCTTTCTCTGGTCAACCTGCGTACAATGATTGGTACATGTCATTTTACAACGTCTTCTTCACTTCACTTCCAGTAATTGCTCTTGGTGTTTTCGATCAGGATGTTTCTGCTCGACTTTGCCTCAAGTATCCCTTCCTCTATCTAGAGGGAGTAGAGGACATCCTCTTCAGCTGGCCCCGGATTCTCAGCTGGATGCTCAATGGCGTAATTAGTTCGGTGATTATCTTCTTCATGACCACCAACGCTGTCTTAAACCAGGCCTTCCGGAGAGACGGTAAGGTGATCGACTTGGAATCACTGGGCGTCACAATGTACACCTGTGTGGTGTGGACTGTGAACACCCAGATGGCACTATCTATCAACTACTTCACCTGGATACAGCATTTTTTCATATGGGGAAGCATTGCCTTCTGGTATGTGTTCTTGCTGCTCTATGGATATCTACCTGCAGCCATATCCACAACAGCTTACAGGGTTCTTGTGGAAGCATGTGCTCCCACTGGTGTGTATTGGCTAGTCACCCTCTTGGTTGTTTTGTGTGCTCTGCTTCCCTATTTCTGCTTTAGGGCTTTTCAGACAAGGTTTCTACCTATGTACCATGATGTTATACAGATAAGACAAGTTCAAGGGTGTGACATTGAGGTGTCTGATGAATTGCCTAGACAGGTGAAGGGCAAACTTGTGCATCTTAGACACAGATTGAAGCAAAGCCAGTTGTAA 3582 0.3984 MPERRRRRIHLSKLYSFSCIKSSFGDDHSQIGQKGYSRVVYCNNPDTPEAVQLNYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPYTALSIVAPLLVVIGATLVKEAVEDWRRRKQDIEANNRKVKVYTRSHSFVETRWKKLRVGDIIKVCKDDYFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKHALEVTAHLNDEISFQKFRAVVKCEDPNENLYSFIGALHYEGKEYPLSLQQILLRDSKLKNTEYIYGVVIFTGHDTKVMQNSTDPPSKRSQIERKMDKIIYILFTTLVLISSIGSVFFGIETKRDIHSGRYRRWYLRPDNTTVFYDPERATFAAIFHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINHDQEMYCEETDRPTRARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTPYGRGITEVEKALARRRGDGEPDIDGESTGVQDQNSDDAVESSQPIKGFNFRDERVMDGQWVNEPHADIIQKFFRVLAICHTAIPDADEKSGEISYEAESPDEAAFVIAARSFGFELLARTQTSISLHEFDHQSAKKVDRIYELLHTLEFSSSRKRMSVIVRNENNQLLLLCKGADSVMFERLSQDGRQFEAETKEHIKRYAEAGLRTLIVTYRELVEEEYKCWEEEFLKAKTSVAADRDALVDTAADKIERNLILLGATAVEDRLQKGVAECIDKLAQAGIKLWVLTGDKMETAVNIGYACSLLRRDMKQIVITLDSPDVLSLEKQGDKEALAKASLESIKKQIKEGISQIKSEKEAYTDRESSAAFGLIIDGKSLDFSLNENLEKSFFELAVNCSSVICCRSSPKQKALVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLQRLLLVHGHWCHRRLAMMICYFFYKNITFGLTLFWYEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSARLCLKYPFLYLEGVEDILFSWPRILSWMLNGVISSVIIFFMTTNAVLNQAFRRDGKVIDLESLGVTMYTCVVWTVNTQMALSINYFTWIQHFFIWGSIAFWYVFLLLYGYLPAAISTTAYRVLVEACAPTGVYWLVTLLVVLCALLPYFCFRAFQTRFLPMYHDVIQIRQVQGCDIEVSDELPRQVKGKLVHLRHRLKQSQL 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1857 1193 Gene3D - 704 913 IPR023214 -
Sto8g1857 1193 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Sto8g1857 1193 Pfam Cation transport ATPase (P-type) 542 630 - -
Sto8g1857 1193 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 1151 IPR023298 -
Sto8g1857 1193 Gene3D - 111 287 - -
Sto8g1857 1193 SFLD p-type atpase 408 924 IPR044492 -
Sto8g1857 1193 SUPERFAMILY Calcium ATPase, transduction domain A 142 284 IPR008250 -
Sto8g1857 1193 Coils Coil 1181 1193 - -
Sto8g1857 1193 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 3 1165 - -
Sto8g1857 1193 CDD P-type_ATPase_APLT_Dnf-like 57 1033 - -
Sto8g1857 1193 SUPERFAMILY HAD-like 419 927 IPR036412 -
Sto8g1857 1193 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Sto8g1857 1193 PRINTS P-type cation-transporting ATPase superfamily signature 873 892 - -
Sto8g1857 1193 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 3 1165 - -
Sto8g1857 1193 MobiDBLite consensus disorder prediction 474 489 - -
Sto8g1857 1193 Pfam Phospholipid-translocating ATPase N-terminal 40 103 IPR032631 -
Sto8g1857 1193 SFLD Haloacid Dehalogenase 408 924 - -
Sto8g1857 1193 Pfam Phospholipid-translocating P-type ATPase C-terminal 901 1151 IPR032630 -
Sto8g1857 1193 Pfam E1-E2 ATPase 136 330 - -
Sto8g1857 1193 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 704 IPR023299 GO:0000166
Sto8g1857 1193 MobiDBLite consensus disorder prediction 460 489 - -
Sto8g1857 1193 Gene3D - 565 703 IPR023299 GO:0000166
Sto8g1857 1193 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 844 955 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto8g1857 1193 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1158 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1857 Sto-Chr8 11866287 11872834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1857 9 1167 Primary Pumps ATPases AT1G68710 64.010 0.0 1619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1857 K01530 - gmx:100779714 2033.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1857 8 11866287 11872834 Sto8g1857 8 11866287 11872834 ECH