Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1856 ATGGAGCAAGCTTCAGAAAAAAGATTTCCTCTCAATGCAAAAGATTACAAGTTATATGAAGAAGTTGGTGAAGGTGTAAGTGCCACTGTGCACAGAGCTCTCTGTATCCCACTTAATGAAACAGTTGCCATCAAGGTTCTTGATCTTGAAAAGTGCAACAATGATCTGGATGGCATCAGGAGAGAGGTACAAACAATGAGTTTGATTAATCATCCAAATCTTTTAAGGGCACATTGCTCTTTCACTAGTGGACATAACCTTTGGGTTGTGATGCCATACATGGCTGGAGGATCCTGCCTTCATATAATGAAATCTGACTATCCCGAGGGTTTTGAAGAGTCTGTTATTGCTACTTTATTGCGGGAGGTTCTCAAAGCTCTTGTGTATCTTCATGCTCATGGGCACATACATAGAGATGTTAAGGCTGGGAATATTTTGATTGATTCTAATGGCGCAGTCAAATTAGCTGACTTTGGAGTGTCAGCGTGTATGTTTGATACTGGAGATAGGCAACGATCGAGAAATACTTTTGTAGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAGCAGTTACATGGATATGACTTCAAGGCTGATATTTGGTCGTTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCTCCAATGAAAGTTTTGCTTATGACTTTACAAAATGCTCCTCCGGGCCTTGATTATGAAAGAGACAAGAGATTTTCTAAGTCTTTCAAAGAGATGGTAGGCACCTGCTTAGTGAAGGACCCAAAGAAACGGCCATCTTCAGAAAAGCTTCTAAAACACCCCTTCTTTAAACATGCGCGCTCCACAGAATATCTAACTCGTACCATTCTGGATGGCCTTTCTCCTCTAGGAGATCGTTTTAGGATGCTGAAGGCAAAAGAGGCAGATTTATTGGTGCAAAATAAGAATCTTTATGAGGATAAAGAACAAATGTCACAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTCAACCTTGAGGATTTGAAAAGTCAAGCTGCTCTGATTCAAGATGATGACATGCCAAATTCAGAAGGGCCAGATATGGGTAAGAAGCCAAAGGACAGGTCTGATGATAATGGGGTTCCAGCAGAAGGGTTATCAACCGCAACGACTAATCTTTCCGATGCTACACCCACAATCGACAAGGAGAATGGGTTCAATGATCATCAGGATTTGGAGAGTTCACTTGCCTCATTTCCAATTAAACCTCTTCAAGCACTCAAAGGTTGTTTCGATGTTTGTGAGGATGATGTAAATAATACTAGTCTAAGGGATTTGGATCGGGATTATGGAAGAAACGATAATGGAAGTTCCAGCCTGAGTAATTCATCGCCTCCTAATGCAATAACTGAGCATAAAAAGTATTTGAGTGGTTCTCTGCTACCTGATAATTATCTTTGTTCTAAAAAGGCTGTTACTGATGGGGACAGGGATTATTTGCAAGCAAAATATTGTTGTGACCGGAATCATAGTGGTCCGTTGTTTCGTCAAAAGAGAGACACCAACAACCTCTCATCCGtTGATGATGCGTCAGATGGAGCAGTTGTCCAGCGCAAGGGGCGTTTTAAGGTTACATCTGCAGATCTCAGTCCCAAGGGTCCTGCAAACTGCAATTTTGGCCCAGTTTCTGGAGGTTCTATCAGCCCACCAAATCAGAACTTTACAGTTGCCTCTATTCTTCCATCACTGCAGTACATGTTGCAACAAAATAGTTTGCAAAGGgaagaaattattaaattaataaaatatgcgGAGCAATCTTGTGGCAAGAATACAGAATCAGCAGAGGTAGGGATAGCTGATCTTTTGCAGGTACCACCTGCAACAACTAGGGAGAGAGAGCTGCATTCACAGGTGATTCAACTACAACAGAGCATTGGGAGTCTTGTCGAGGAATTGCAAAGACAAAGGGTGAAAAATGCCCAGAGTGTAGTAGACGAGGAAATGATATCTCACCGTCAATTTGGTTTGCAGTTAGAGAAGCAGCTGAACTCTGTAGTGAATAGAGTGGAAGAGTGA 2067 0.4146 MEQASEKRFPLNAKDYKLYEEVGEGVSATVHRALCIPLNETVAIKVLDLEKCNNDLDGIRREVQTMSLINHPNLLRAHCSFTSGHNLWVVMPYMAGGSCLHIMKSDYPEGFEESVIATLLREVLKALVYLHAHGHIHRDVKAGNILIDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVGTCLVKDPKKRPSSEKLLKHPFFKHARSTEYLTRTILDGLSPLGDRFRMLKAKEADLLVQNKNLYEDKEQMSQKEYIRGISAWNFNLEDLKSQAALIQDDDMPNSEGPDMGKKPKDRSDDNGVPAEGLSTATTNLSDATPTIDKENGFNDHQDLESSLASFPIKPLQALKGCFDVCEDDVNNTSLRDLDRDYGRNDNGSSSLSNSSPPNAITEHKKYLSGSLLPDNYLCSKKAVTDGDRDYLQAKYCCDRNHSGPLFRQKRDTNNLSSVDDASDGAVVQRKGRFKVTSADLSPKGPANCNFGPVSGGSISPPNQNFTVASILPSLQYMLQQNSLQREEIIKLIKYAEQSCGKNTESAEVGIADLLQVPPATTRERELHSQVIQLQQSIGSLVEELQRQRVKNAQSVVDEEMISHRQFGLQLEKQLNSVVNRVEE 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1856 688 SUPERFAMILY Protein kinase-like (PK-like) 13 306 IPR011009 -
Sto8g1856 688 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1856 688 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Sto8g1856 688 Gene3D Transferase(Phosphotransferase) domain 1 97 329 - -
Sto8g1856 688 MobiDBLite consensus disorder prediction 379 397 - -
Sto8g1856 688 MobiDBLite consensus disorder prediction 359 376 - -
Sto8g1856 688 MobiDBLite consensus disorder prediction 438 466 - -
Sto8g1856 688 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1856 688 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Sto8g1856 688 CDD STKc_OSR1_SPAK 14 277 - -
Sto8g1856 688 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 659 - -
Sto8g1856 688 MobiDBLite consensus disorder prediction 449 466 - -
Sto8g1856 688 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 659 - -
Sto8g1856 688 MobiDBLite consensus disorder prediction 350 405 - -
Sto8g1856 688 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1856 Sto-Chr8 11850901 11859846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1856 1 685 MAP Kinase Kinase Kinase Kinase AT5G14720 66.952 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Sto8g1856 Pkinase 8.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1856 K08835 - gmx:100778837 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1856 8 11850901 11859846 Sto8g1856 8 11850901 11859846 ECH