Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1840 ATGCGCCTTCTTGATCATCCTAATGTAGTGTCGCTCAAACACTGCTTCTTTTCTACCACAGACAAGGATGAACTCTATCTCAATTTGGTACTCGAGTACGTACCCGAAACGGTATATCGAGTGGTGAAGCACTATAGCAAGGCAAATCAACGGATGCCCTTGATATATGTTAAACTCTACACCTATCAGATTTGCAGAGCTTTGGCTTATATTCACGGATGTGTTGGAGTGTGCCACAGGGACATTAAGCCTCAGAATCTTCTGGTTAATCCACACACTCATCAGGTCAAGCTTTGTGATTTTGGAAGTGCAAAAGTTCTGGTCAAAGGCGAACCTAATATATCATACATTTGCTCTCGTTACTACCGAGCACCTGAACTCATTTTTGGGGCAACTGAATATACTACTGCAATCGATATGTGGTCTGTGGGTTGCGTCCTTGCCGAGCTTCTCCTTGGACAGCCTCTATTCCCTGGTGAAAGTGGAGTTGATCAACTTGTTGAGATTATCAAGgTTCTCGGAACTCCAACTCGGGAGGAGATAAAGTGCATGAATCCAAACTATACGGAGTTTAAATTCCCTCAAATCAAGGCTCATCCATGGCATAAGATATTCCATAAGCGGATGCCCCCAGAAGCAGTAGATCTTGTTTCAAGACTCCTCCAGTACTCTCCAAATTTACGATGCACAGCTTTGGACGCTTGTATCCACCCATTCTTCGATGAACTTCGCGATCCTAATACCCGTCTTCCAAACGGCCGCCCTTTGCCGCCTCTCTTTAACTTCAAACCTCATGAGCTAAAAGGAGCAACCTTGGAGTTGATATGCAAACTTGTTCCGGAACATGCTCGGAAGCAATGTCCTTCGCTTAACTTCTAA 879 0.4448 MRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVYRVVKHYSKANQRMPLIYVKLYTYQICRALAYIHGCVGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDACIHPFFDELRDPNTRLPNGRPLPPLFNFKPHELKGATLELICKLVPEHARKQCPSLNF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1840 292 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1840 292 CDD STKc_GSK3 1 243 IPR039192 -
Sto8g1840 292 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 288 - -
Sto8g1840 292 SMART serkin_6 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1840 292 Gene3D Transferase(Phosphotransferase) domain 1 36 284 - -
Sto8g1840 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Sto8g1840 292 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Sto8g1840 292 PANTHER OS01G0252100 PROTEIN 1 288 - -
Sto8g1840 292 Pfam Protein kinase domain 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1840 292 SUPERFAMILY Protein kinase-like (PK-like) 1 265 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1840 Sto-Chr8 11754740 11758317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1840 7 243 Core Cell Cycle Gene Families AT1G76540 36.134 5.66e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Sto8g1840 Pkinase 4.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1840 - - tcc:18600782 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1840 8 11754740 11758317 Sto8g1840 8 11754740 11758317 ECH