Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1833 ATGGAGACCCCTCTTCTGCTGCCATTGACAATactcgtcttcttcttcttcctaacGTTGTGTCCGTACCATGCTCATGCGCAATCCCGCTTCGATGTCATCGCGCGGTCATGCAGGCACGCCAATGTCCAGGACAGGGATAGGTATTCACGCGCCTATTGGAAGATGAGGAATGAGATGTTGGATGAAATGTCTCGCGAGAAATTCTCCTTCAAGGAAGCCGGTGATCCTCCCGATCGTCTCTATCTCTTCTCCCAGTGCATGGACGATCTTTCTCAATCGGAATGTAGAAGTTGCTACCGGAAGCTCGATGACCTCCTTTCTTATTGCCTTCCCTCCACCGGCGGTCGTGTTTACTCCGATGGTTGCTTCATTAGGGCTGAGAATTATAGTTTCTATCGGGAGAACATCACTCCTGATGATCTCAAGAGATGCAGTGACGGCAAAGAACAGGAAAAAGAGTATACAACCATGACTTCAAATTTAGTGGTTCAAATGGCATTGAAGGCACCAGCTCGAGGAGGCTTCATAGTGATGCAagagaaattgccttcgggtgTGGCAGTCTATGGTTTGGCTTCCTGTTGGAAGACGTTGGATCAAGAAATGTGTTCGGCATGCCTTGCTAATGCAGCTAGCACTTCCATATCCTGCCTACCTTCCTCACAGGGCCGTGTGCTAAATGCCGGCTGCTTTCTACGTTATGCTGATTATGACTTCTCCAATGATGGAAGAAAGGGAGAAGGAAGAGCTGCTGGGTTAGTGCACTTCACCGCACTTCACGAGACGTGCACTTTAGAGGAtctgtcttcttctttttattttattttatttatttatttattgtttgtgGAGGAGGGGGGAGATACTGTAGCAAAGTACGTTGCTTATGTTTTTGTTGCAATTGCTGTCTGTTCATTGGCTATTCTAATTGGTTACTATGTTGGTAAATCCGCTTGCAAACTAAGTAGTCATCCGAACAAAGAAGGACCAGAAATGGAGATGTCAATATTAAAGAGGAACTTACAATTCATACAATTCAAGTACTCAACATTAGTAAAAGCAACTGATGACTTTAATGAATCCCGCAAGCTTGGTCAAGGAGGATACGGTGAAGTATACAAGGGAACCTTACCAGATGGCAGAGAAATTGCAATAAAACGTATGATTTTAAGTGGTAAGCATGGGACAGAAGATGTGTACAATGAAATGGATGTGATCAGTAGAGCTCAACACAAGAATCTGGTTCGTTTCCTTGGCTGCTGCTTCACCTCAGCAGAAAGCTTTCTCATCTATGAATATCTTCCCAATGGGACTATCAGCTACAACTTATTTGAATACCTTGCTGAGGGACGATTAACAGAAAAAGTTGACACCTATAGCTTTGGGGTACTTGTGCTTGAAATTGTCAGTGGAATTGCAAACAGCAAATTTGAGTCTGCAGAAACCTTTGAAACTCTTGTTGGTCATGCATGGAAGCATTTCCAATCAAACACGGCATCGGAAATTATCGATGAAAGCATGGAGGGTagagatgatgaagaaatttTAAGAGTTGTCCAGGTTGGGCTTTTGTGTACCCAAGAGCTACCATCTTTACGTCCTAGCATGACAGAGGTGACAAAAATGCTTAAACAAAAGAATGTTGAACTGCCAGCACCTTCTAAACCTCCATTTACTGTGGCCTCGTTTTCCTTATAG 1701 0.4168 METPLLLPLTILVFFFFLTLCPYHAHAQSRFDVIARSCRHANVQDRDRYSRAYWKMRNEMLDEMSREKFSFKEAGDPPDRLYLFSQCMDDLSQSECRSCYRKLDDLLSYCLPSTGGRVYSDGCFIRAENYSFYRENITPDDLKRCSDGKEQEKEYTTMTSNLVVQMALKAPARGGFIVMQEKLPSGVAVYGLASCWKTLDQEMCSACLANAASTSISCLPSSQGRVLNAGCFLRYADYDFSNDGRKGEGRAAGLVHFTALHETCTLEDLSSSFYFILFIYLLFVEEGGDTVAKYVAYVFVAIAVCSLAILIGYYVGKSACKLSSHPNKEGPEMEMSILKRNLQFIQFKYSTLVKATDDFNESRKLGQGGYGEVYKGTLPDGREIAIKRMILSGKHGTEDVYNEMDVISRAQHKNLVRFLGCCFTSAESFLIYEYLPNGTISYNLFEYLAEGRLTEKVDTYSFGVLVLEIVSGIANSKFESAETFETLVGHAWKHFQSNTASEIIDESMEGRDDEEILRVVQVGLLCTQELPSLRPSMTEVTKMLKQKNVELPAPSKPPFTVASFSL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1833 566 Gene3D - 143 240 IPR038408 -
Sto8g1833 566 Gene3D - 30 132 IPR038408 -
Sto8g1833 566 Pfam Salt stress response/antifungal 150 238 IPR002902 -
Sto8g1833 566 Pfam Salt stress response/antifungal 48 130 IPR002902 -
Sto8g1833 566 Gene3D Transferase(Phosphotransferase) domain 1 434 551 - -
Sto8g1833 566 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 438 563 - -
Sto8g1833 566 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 11 445 - -
Sto8g1833 566 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 438 563 - -
Sto8g1833 566 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 11 445 - -
Sto8g1833 566 ProSiteProfiles Gnk2-homologous domain profile. 137 240 IPR002902 -
Sto8g1833 566 Gene3D Phosphorylase Kinase; domain 1 319 433 - -
Sto8g1833 566 ProSiteProfiles Gnk2-homologous domain profile. 31 132 IPR002902 -
Sto8g1833 566 ProSiteProfiles Protein kinase domain profile. 359 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1833 566 Pfam Protein kinase domain 359 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1833 566 SUPERFAMILY Protein kinase-like (PK-like) 343 563 IPR011009 -
Sto8g1833 566 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1833 Sto-Chr8 11705427 11708834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1833 438 559 Receptor kinase-like Gene Family AT4G28670 53.659 2.19e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto8g1833 Pkinase 6.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1833 - - qsu:111997502 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1833 8 11705427 11708834 Sto8g1833 8 11705427 11708834 ECH