Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1832 ATGGAGTCCCTCTCCAAGAACATCACCTCCAACAATTGGGCCTCCCACTCTGtgatctcctcctcctcctccattcCCATCTTCGCCCTCGCTCACTGCTTCCGCGATCTCTCCCACACCGACTGCCTCCTCTGCTACGCCGCCAGCCGCACCAGGCTCCCCCGATGCCTCCCCGCCGTCGCCGCCCGCATCTACCTCGACGGCTGCTTCCTGCGCTACGACAATTACAGTTTCTACTCGGAAGCGACGGATTCTGCGACGGATAGGGTGAATTGCAGTTCCAAGTATGGGGAGGTGAGGGATGGAGGAGAGAGGTGGGAGCACGAGAAGAGTGTGATGGAGGTGGTTGAGAAGGTGGTTAGGGTTAGTGTGAGGCAgggagggtttggggttggggagGTTGGGGGGGTTTATGCGTTGGCTCAGTGTTGGGAAAGTGTGGGGAGTGATGGGTGTAGGGATTGCTTGGAGAAGGCGGAGAAGGAGGTGAGAGGGTGCTTGCCTAAGAGGGAAGGGAGGGCGTTGAATGCTGGGTGTTATTTGAGGTATTCCACTGAGAAGTTCTACAACGAAGGAGGTGAAGTACATGAAGAAGATGATAGAAATGGGTCATTTAAAAGAGGAGCCATCACAGCAATAGTTTTAGCTGCGGCTGCACTTTTGATGCTATCTCTCTCTGCGTGTTATGCGGCCTTCTCAAGGATATCGAAGCTGAATAAAGACCCAGAAAGCAAGAACCTTGGTCAGATTTCCCTTTCCATAAACAAATCGAGCTTGAATTTCAAATACGAAACTCTGGAGAAGGCCACGGATTATTTCAACGCTTCAAGGAAAATAGGCCAAGGAGGAGCTGGTTCTGTGTTCAAAGGGACTCTCCCAAATGGGGAAGTTGTGGCAGTGAAGAGATTGGTGTTCAATACAAGGCAGTGGGTTGATGAGTTCTTCAATGAAGTTAATTTGATTAGTGGAATTGAGCACAAGAACCTTGTGAAACTCTTGGGTTGTAGCATTGAAGGCCCTGAGAGCCTCCTGGTATATGAATACCTACCCAACAAGAGCTTGGATCAGTTCCTTTTCGaaaagaagaaaactcAGATTCTGAAGTGGAAACAGCGGTTTGATATAATTATTGGAACAGCTGAGGGATTAGCATATCTTCACGCAGGCtctaaaataagaataatccaTAGAGACATCAAAAGCAGCAACATTCTTCTGGATGAGAATCTCACTCCTAAGATTGCAGACTTTGGTCTTGCCAGATGTTTTGCTGCTGACAAAACGCATCTCAGCACGGGAATTGCTGGAACACTGTGA 1317 0.4647 MESLSKNITSNNWASHSVISSSSSIPIFALAHCFRDLSHTDCLLCYAASRTRLPRCLPAVAARIYLDGCFLRYDNYSFYSEATDSATDRVNCSSKYGEVRDGGERWEHEKSVMEVVEKVVRVSVRQGGFGVGEVGGVYALAQCWESVGSDGCRDCLEKAEKEVRGCLPKREGRALNAGCYLRYSTEKFYNEGGEVHEEDDRNGSFKRGAITAIVLAAAALLMLSLSACYAAFSRISKLNKDPESKNLGQISLSINKSSLNFKYETLEKATDYFNASRKIGQGGAGSVFKGTLPNGEVVAVKRLVFNTRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPNKSLDQFLFEKKKTQILKWKQRFDIIIGTAEGLAYLHAGSKIRIIHRDIKSSNILLDENLTPKIADFGLARCFAADKTHLSTGIAGTL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1832 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 394 406 IPR008271 GO:0004672|GO:0006468
Sto8g1832 438 Gene3D - 107 188 IPR038408 -
Sto8g1832 438 Gene3D - 1 78 IPR038408 -
Sto8g1832 438 Gene3D Transferase(Phosphotransferase) domain 1 349 438 - -
Sto8g1832 438 SUPERFAMILY Protein kinase-like (PK-like) 254 437 IPR011009 -
Sto8g1832 438 ProSiteProfiles Gnk2-homologous domain profile. 87 188 IPR002902 -
Sto8g1832 438 ProSiteProfiles Gnk2-homologous domain profile. 1 78 IPR002902 -
Sto8g1832 438 ProSiteProfiles Protein kinase domain profile. 273 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1832 438 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 438 - -
Sto8g1832 438 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 1 438 - -
Sto8g1832 438 SMART serkin_6 273 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1832 438 Gene3D Phosphorylase Kinase; domain 1 233 348 - -
Sto8g1832 438 Pfam Salt stress response/antifungal 129 185 IPR002902 -
Sto8g1832 438 Pfam Salt stress response/antifungal 17 76 IPR002902 -
Sto8g1832 438 Pfam Protein tyrosine and serine/threonine kinase 275 429 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1832 Sto-Chr8 11699571 11701249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1832 1 438 Receptor kinase-like Gene Family AT5G40380 60.502 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto8g1832 PK_Tyr_Ser-Thr 2.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1832 - - ccaj:109803078 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1832 8 11699571 11701249 Sto8g1832 8 11699571 11701249 ECH