LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g1825	ATGAATACGACGCCGTTCATGGATAAGCAGATAATGGATCTAACTCAAGGATCGTCTCAGAGCAAGGATTTCATCGACCTGATGGGCCATCctaaggaggaggaagaagtagACGTAGAGGGTGAAGCTCGCCGTGGCGGCCACCACTCAATCGGTGGCAATGGGATTAAGAAGGAGGATATCGTTCCCAGCTACGATTTCCAGCCGATTCGCCCGCTTGGAACTTCGTCTCAGTCTTCCAATCACGATTCTACACCTAATCTCGGAGCGGTTTCTAGGCCTTGGAGTTCTGACTCCAAGTCTAACACTACCACTGCAATGATCAGAAATTACAGTTCTCTGGATTCTCTTGAACCTGCAAAAGTCATAGTAGAAAAGGATCAAAATGCCTTTGATGCTACAATTTTGTCTGAGATTGATCGAACCATGAAGAAACATATGGAAAATTTGCTCCATGTTCTGGAAGGTGTTAGTGCAAGGTTAACACAGCTAGAAAGCAGAACCCACCATCTTGAGAATTCTATGGATGATTTAAAGCTATTTGTTGGAAACAATCATGGTAGCACTGATGGGAAAATGAGGCAGCTGGAGAATATCCTTAGAGAGGTGCAAGCAGGGGTACATGATTTGCAGGATAAGCAAAGTGTGGCAGAAGCTCAGCTGCAGCTGGCAAAGCTACAAGTTTCCAAGGTGGACCAACAATCTGAAACTCAGACTAGTGTGATTACAGATCCTATGCAGCATGCTGCATCTGCCCCCCAGCAACCTCAGCAACAACTTGCAACATCTTTTAATCTTCCTCCATCAATTCCTGCAGTTCCTCACCCTAATGCTCCTCCTCAACCACCCCAACAGGGTATGCCCCCTCCAGTTCAACCTCCTAATCAGTTTCCTCAGAACCAAATGCCTTCTGTTCCACAGCGAGAACCATACTTCCAACCACCTCCTCAACCTCATGAAACCCCCAATCAGCAATACCAACTGCCTTTGTCTCAGCAGCCACAAGCTCCTCCCGTGCCAGCCCCACAGCAACAATATCAACAGACCCCTCAACCCCAGTACACTCAGCCTGCACTTCATCCACCACAACAGCAACAGCCATCGCCTTCACCTGTTAATCCCCCACCACAACTACCATCTTCTCTGGGCCACCATGTGGAAGAGTCATCTTATGTTCCTCCTCAGAATTACCCACCTAATGTCCGCCCGCCACCATCTCAGCCACCCAGTGGACCACCTCCCTCCCAGCCATTCTATGGGCCGCATTCCCACGTGTTTGAACCACTGTCCAGTAGATCTGGTTCAGGTTTCTCTTCTGGATATAGTGCACCACCGGGGCCCGCTGAGCCATATCATTATGGTGGATCACCTCAGTATGCCATGGCTCCTCCAAGTGGTGGAAATGGTTACCCACAGCTCCCAACTGCACGGGTGCTGCCGCATGCATTACCTACTGCTTCAGGGACAAGTGGCAGTTCGGGTTCTGGTGGGTCTGGAAACAGGGTTCCCATTGATGATGTGGTTGACAAAGTGGCAAGTATGGGATTCCCTAGAGACCATGTGAGGGCAACAGTTCGGAAGCTAACAGAGAATGGTCAATCAGTTGACCTTAATATAGTGCTGGATAAACTTATGAATGAAAGTGATATTCAGCCAAGAGGTTGGTATGGTCGGTAG	1677	0.4824	MNTTPFMDKQIMDLTQGSSQSKDFIDLMGHPKEEEEVDVEGEARRGGHHSIGGNGIKKEDIVPSYDFQPIRPLGTSSQSSNHDSTPNLGAVSRPWSSDSKSNTTTAMIRNYSSLDSLEPAKVIVEKDQNAFDATILSEIDRTMKKHMENLLHVLEGVSARLTQLESRTHHLENSMDDLKLFVGNNHGSTDGKMRQLENILREVQAGVHDLQDKQSVAEAQLQLAKLQVSKVDQQSETQTSVITDPMQHAASAPQQPQQQLATSFNLPPSIPAVPHPNAPPQPPQQGMPPPVQPPNQFPQNQMPSVPQREPYFQPPPQPHETPNQQYQLPLSQQPQAPPVPAPQQQYQQTPQPQYTQPALHPPQQQQPSPSPVNPPPQLPSSLGHHVEESSYVPPQNYPPNVRPPPSQPPSGPPPSQPFYGPHSHVFEPLSSRSGSGFSSGYSAPPGPAEPYHYGGSPQYAMAPPSGGNGYPQLPTARVLPHALPTASGTSGSSGSGGSGNRVPIDDVVDKVASMGFPRDHVRATVRKLTENGQSVDLNIVLDKLMNESDIQPRGWYGR	558

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	245	266	-	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	70	102	-	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	269	300	-	-
	Sto8g1825	558	Pfam	UBA-like domain (DUF1421)	504	548	IPR010820	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	396	419	-	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	1	102	-	-
	Sto8g1825	558	Coils	Coil	147	167	-	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	362	378	-	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	1	23	-	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	485	499	-	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	308	322	-	-
	Sto8g1825	558	Coils	Coil	216	236	-	-
	Sto8g1825	558	PANTHER	RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED	1	558	-	-
	Sto8g1825	558	Gene3D	-	137	239	-	-
	Sto8g1825	558	Coils	Coil	193	213	-	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	245	503	-	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	26	55	-	-
	Sto8g1825	558	PANTHER	RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED	1	558	-	-
	Sto8g1825	558	MobiDBLite	consensus disorder prediction	346	361	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g1825	Sto-Chr8	11637709	11642471	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g1825	1	312	Trihelix Transcription Factor Family	AT5G14540	44.479	8.78e-67	224

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g1825	-		-	gmx:100777464	562.762